Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1482 |
Symbol | |
ID | 3908795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1671295 |
End bp | 1672056 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637883377 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_485103 |
Protein GI | 86748607 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCG GACGGCGGCA GCGGATCAAT ACGGCGATCT CGATTTTGTC GATCCCGCTG TTCCTGCTGG TCTGGGAGCT GGTGTCGCGC TCGCAGATCG TCAACATCAT TCTGTTTCCG CCGCCGACCG TGGTGGCGGT GGCGATGGGC GAGTGGATCA AGAGCGGCGA GTTTGCGGTC GATCTGGCCT ACAGCGTCGC GCGCGTCGTC AGCGGCTATC TGCTCGGCGC CAGCATCGGC GTGGTGTTCG GCGTGCTGAC CGGTCAGTTC CAGATGATCT CGAGCCTGTT CTCGCCGGTG TTTCATATCT TGCGCCCGAT CCCGCCAATC GCCTTCGTGC CGATCGTGAT CCTGTGGTTC GGGCTGTCGG AGACCGGCAA GATCTTTCTG GTGTTCTGGG GCGTGTTCTT CACCGTGTGG CTGACCACCC ACATCGGCGT GCAGAAGATC GATCGCGGAC TGATCCGCGC CGCCTTGATG CTGGGCACGC CGCGCCGCCG CATGCTGACC GAGATCGTGC TGTTCGGCGC GCTGCCCTAC ATCGCGGTCG GGCTGCGCAC TGCGGTCAGC ATCTCGTTCT ATACGCTGGT CGCCGCCGAA CTGGCCGGTG CCTTCGCGGG CATCGTCTAC CGGATCGAGA TCGCGCAGCA GAATTTGCAG ACCGGCCAGG TGATGGGCGG GCTGGTGGCG CTGGGGGCGA TCTCGTTTCT GGCCGATCGC GGATTTTCCG CGCTGACGCA ACGACTGGTG TGGTGGCGAT GA
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Protein sequence | MSSGRRQRIN TAISILSIPL FLLVWELVSR SQIVNIILFP PPTVVAVAMG EWIKSGEFAV DLAYSVARVV SGYLLGASIG VVFGVLTGQF QMISSLFSPV FHILRPIPPI AFVPIVILWF GLSETGKIFL VFWGVFFTVW LTTHIGVQKI DRGLIRAALM LGTPRRRMLT EIVLFGALPY IAVGLRTAVS ISFYTLVAAE LAGAFAGIVY RIEIAQQNLQ TGQVMGGLVA LGAISFLADR GFSALTQRLV WWR
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