| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1482 |
|---|
| Symbol | |
|---|
| ID | 3908795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1671295 |
|---|
| End bp | 1672056 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637883377 |
|---|
| Product | binding-protein dependent transport system inner membrane protein |
|---|
| Protein accession | YP_485103 |
|---|
| Protein GI | 86748607 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG GACGGCGGCA GCGGATCAAT ACGGCGATCT CGATTTTGTC GATCCCGCTG
TTCCTGCTGG TCTGGGAGCT GGTGTCGCGC TCGCAGATCG TCAACATCAT TCTGTTTCCG
CCGCCGACCG TGGTGGCGGT GGCGATGGGC GAGTGGATCA AGAGCGGCGA GTTTGCGGTC
GATCTGGCCT ACAGCGTCGC GCGCGTCGTC AGCGGCTATC TGCTCGGCGC CAGCATCGGC
GTGGTGTTCG GCGTGCTGAC CGGTCAGTTC CAGATGATCT CGAGCCTGTT CTCGCCGGTG
TTTCATATCT TGCGCCCGAT CCCGCCAATC GCCTTCGTGC CGATCGTGAT CCTGTGGTTC
GGGCTGTCGG AGACCGGCAA GATCTTTCTG GTGTTCTGGG GCGTGTTCTT CACCGTGTGG
CTGACCACCC ACATCGGCGT GCAGAAGATC GATCGCGGAC TGATCCGCGC CGCCTTGATG
CTGGGCACGC CGCGCCGCCG CATGCTGACC GAGATCGTGC TGTTCGGCGC GCTGCCCTAC
ATCGCGGTCG GGCTGCGCAC TGCGGTCAGC ATCTCGTTCT ATACGCTGGT CGCCGCCGAA
CTGGCCGGTG CCTTCGCGGG CATCGTCTAC CGGATCGAGA TCGCGCAGCA GAATTTGCAG
ACCGGCCAGG TGATGGGCGG GCTGGTGGCG CTGGGGGCGA TCTCGTTTCT GGCCGATCGC
GGATTTTCCG CGCTGACGCA ACGACTGGTG TGGTGGCGAT GA
|
|---|
| Protein sequence | MSSGRRQRIN TAISILSIPL FLLVWELVSR SQIVNIILFP PPTVVAVAMG EWIKSGEFAV
DLAYSVARVV SGYLLGASIG VVFGVLTGQF QMISSLFSPV FHILRPIPPI AFVPIVILWF
GLSETGKIFL VFWGVFFTVW LTTHIGVQKI DRGLIRAALM LGTPRRRMLT EIVLFGALPY
IAVGLRTAVS ISFYTLVAAE LAGAFAGIVY RIEIAQQNLQ TGQVMGGLVA LGAISFLADR
GFSALTQRLV WWR
|
|---|
| |