More than 300 homologs were found in PanDaTox collection
for query gene Shew_0981 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_0981  response regulator receiver protein  100 
 
 		 155 aa  318  1.9999999999999998e-86  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_4132  response regulator receiver modulated diguanylate cyclase  63.85 
 
 		 310 aa  178  2e-44  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4204  response regulator receiver modulated diguanylate cyclase  63.85 
 
 		 310 aa  178  2e-44  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4336  response regulator receiver modulated diguanylate cyclase  63.08 
 
 		 310 aa  177  5.999999999999999e-44  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_4015  response regulator receiver modulated diguanylate cyclase  61.54 
 
 		 315 aa  175  2e-43  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_2812  diguanylate cyclase  58.59 
 
 		 315 aa  166  1e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_1684  GGDEF domain-containing protein  60.94 
 
 		 323 aa  165  2e-40  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  53.38 
 
 		 322 aa  149  1e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  46.94 
 
 		 383 aa  136  8.999999999999999e-32  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  46.94 
 
 		 383 aa  136  1e-31  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  48.03 
 
 		 348 aa  131  3e-30  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  47.45 
 
 		 363 aa  131  3e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  48.44 
 
 		 353 aa  130  9e-30  Magnetococcus sp. MC-1  Bacteria  normal  1  hitchhiker  0.000480818 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  48.87 
 
 		 340 aa  129  1.0000000000000001e-29  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.129077 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  48.48 
 
 		 339 aa  127  5.0000000000000004e-29  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  49.61 
 
 		 339 aa  127  6e-29  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  49.22 
 
 		 328 aa  127  7.000000000000001e-29  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  47.24 
 
 		 337 aa  126  9.000000000000001e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  46.88 
 
 		 312 aa  126  9.000000000000001e-29  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  44.88 
 
 		 300 aa  126  1.0000000000000001e-28  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 		 338 aa  125  2.0000000000000002e-28  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 		 338 aa  125  2.0000000000000002e-28  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  46.88 
 
 		 319 aa  125  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 		 338 aa  125  3e-28  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  46.97 
 
 		 338 aa  125  3e-28  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0860  response regulator  48.12 
 
 		 339 aa  124  5e-28  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  48.12 
 
 		 338 aa  123  1e-27  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  47.37 
 
 		 338 aa  122  2e-27  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  47.37 
 
 		 338 aa  122  2e-27  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  47.37 
 
 		 338 aa  122  2e-27  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  43.24 
 
 		 359 aa  121  3e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  44.53 
 
 		 308 aa  122  3e-27  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  45.86 
 
 		 331 aa  120  5e-27  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  45.86 
 
 		 331 aa  120  5e-27  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_3669  diguanylate cyclase  39.86 
 
 		 300 aa  120  6e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0119902  n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  46.48 
 
 		 379 aa  120  8e-27  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_012560  Avin_29300  Response regulator  42.75 
 
 		 310 aa  120  8e-27  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  47.54 
 
 		 322 aa  119  9.999999999999999e-27  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  43.38 
 
 		 328 aa  119  9.999999999999999e-27  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.0637882 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  45.38 
 
 		 370 aa  119  1.9999999999999998e-26  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  45.04 
 
 		 349 aa  119  1.9999999999999998e-26  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  43.05 
 
 		 348 aa  119  1.9999999999999998e-26  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  43.05 
 
 		 348 aa  119  1.9999999999999998e-26  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  43.57 
 
 		 331 aa  119  1.9999999999999998e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  44 
 
 		 377 aa  118  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  46.03 
 
 		 377 aa  118  3e-26  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  45.45 
 
 		 331 aa  118  3e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  44.36 
 
 		 363 aa  117  4.9999999999999996e-26  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  48.72 
 
 		 356 aa  117  6e-26  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007575  Suden_0218  diguanylate cyclase  50.86 
 
 		 304 aa  117  6e-26  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  45.11 
 
 		 331 aa  117  6e-26  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  46.03 
 
 		 377 aa  117  7e-26  Acidovorax sp. JS42  Bacteria  normal  1  normal  0.0516082 
 
 
-
 
NC_009831  Ssed_1382  response regulator receiver protein  45.31 
 
 		 302 aa  117  9e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_0979  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  47.11 
 
 		 816 aa  116  9e-26  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0205  response regulator receiver protein  43.75 
 
 		 395 aa  116  9.999999999999999e-26  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  44.09 
 
 		 217 aa  116  9.999999999999999e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  45.65 
 
 		 360 aa  116  9.999999999999999e-26  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  46.88 
 
 		 376 aa  116  9.999999999999999e-26  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  43.17 
 
 		 367 aa  116  9.999999999999999e-26  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  43.65 
 
 		 305 aa  115  1.9999999999999998e-25  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  44.12 
 
 		 310 aa  115  1.9999999999999998e-25  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  48.03 
 
 		 204 aa  115  1.9999999999999998e-25  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  45.04 
 
 		 350 aa  115  1.9999999999999998e-25  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  43.28 
 
 		 301 aa  115  1.9999999999999998e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0153071 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  49.23 
 
 		 1691 aa  115  1.9999999999999998e-25  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  46.67 
 
 		 359 aa  114  5e-25  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  43.61 
 
 		 346 aa  114  6e-25  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  46.81 
 
 		 358 aa  113  7.999999999999999e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_63210  putative two-component response regulator  44.44 
 
 		 393 aa  113  7.999999999999999e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  42.34 
 
 		 395 aa  113  8.999999999999998e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  39.07 
 
 		 316 aa  113  1.0000000000000001e-24  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  40.13 
 
 		 353 aa  112  1.0000000000000001e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  45.31 
 
 		 305 aa  113  1.0000000000000001e-24  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  45.74 
 
 		 365 aa  113  1.0000000000000001e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0748941 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  42.45 
 
 		 352 aa  112  2.0000000000000002e-24  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_4003  response regulator  45.86 
 
 		 357 aa  112  2.0000000000000002e-24  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  41.06 
 
 		 365 aa  112  2.0000000000000002e-24  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  42.06 
 
 		 314 aa  112  2.0000000000000002e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  42.86 
 
 		 308 aa  112  2.0000000000000002e-24  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  46.46 
 
 		 204 aa  112  2.0000000000000002e-24  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  48.41 
 
 		 331 aa  112  3e-24  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  41.43 
 
 		 384 aa  111  3e-24  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal  1 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  42.75 
 
 		 333 aa  111  3e-24  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  43.85 
 
 		 338 aa  112  3e-24  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  40.56 
 
 		 383 aa  112  3e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_008700  Sama_0748  response regulator receiver protein  40 
 
 		 312 aa  111  4.0000000000000004e-24  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  43.28 
 
 		 347 aa  111  4.0000000000000004e-24  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  40.85 
 
 		 384 aa  111  4.0000000000000004e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_010725  Mpop_0907  response regulator receiver modulated diguanylate cyclase  42.86 
 
 		 457 aa  111  5e-24  Methylobacterium populi BJ001  Bacteria  normal  0.401363  normal  0.40647 
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  42.06 
 
 		 395 aa  110  6e-24  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_002977  MCA3081  sensory box protein/response regulator  43.57 
 
 		 710 aa  110  7.000000000000001e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  0.789878  n/a   
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  44.44 
 
 		 395 aa  110  9e-24  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_2528  response regulator receiver protein  43.41 
 
 		 378 aa  109  1.0000000000000001e-23  Magnetococcus sp. MC-1  Bacteria  normal  0.249668  normal  0.0734484 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  40.43 
 
 		 378 aa  108  2.0000000000000002e-23  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.215089 
 
 
-
 
NC_008254  Meso_1348  response regulator PleD  45 
 
 		 457 aa  108  3e-23  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_0967  diguanylate cyclase  43.31 
 
 		 457 aa  108  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.555277  normal  0.0207283 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  44 
 
 		 343 aa  108  4.0000000000000004e-23  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.00000482447 
 
 
-
 
NC_011757  Mchl_0931  response regulator receiver modulated diguanylate cyclase  43.31 
 
 		 457 aa  108  4.0000000000000004e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.436852  normal  0.104843 
 
 
-
 
NC_008345  Sfri_3384  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  44.8 
 
 		 829 aa  108  4.0000000000000004e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  44.96 
 
 		 457 aa  107  5e-23  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
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