More than 300 homologs were found in PanDaTox collection
for query gene Rsph17029_2163 on replicon NC_009049
Organism: Rhodobacter sphaeroides ATCC 17029



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009049  Rsph17029_2163  two component LuxR family transcriptional regulator  100 
 
 		 191 aa  362  2e-99  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.394692  normal  0.0704049 
 
 
-
 
NC_007493  RSP_0511  two component LuxR family transcriptional regulator  97.38 
 
 		 191 aa  353  6.999999999999999e-97  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_2422  two component LuxR family transcriptional regulator  57.5 
 
 		 196 aa  184  6e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0496562  normal  0.787858 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  34.48 
 
 		 214 aa  102  4e-21  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0087  two component transcriptional regulator, LuxR  33.99 
 
 		 210 aa  100  2e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.197031  n/a   
 
 
-
 
NC_009049  Rsph17029_1723  two component LuxR family transcriptional regulator  33.99 
 
 		 240 aa  100  2e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1676  two component LuxR family transcriptional regulator  34.48 
 
 		 210 aa  100  2e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.123322  normal  1 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  33.99 
 
 		 204 aa  90.5  1e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  35.92 
 
 		 235 aa  82  0.000000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  31.31 
 
 		 209 aa  80.9  0.00000000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  32.37 
 
 		 212 aa  79.3  0.00000000000003  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_007489  RSP_4133  two component LuxR family transcriptional regulator  28.49 
 
 		 240 aa  75.9  0.0000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  30.77 
 
 		 207 aa  75.5  0.0000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_007489  RSP_4131  two component LuxR family transcriptional regulator  30.69 
 
 		 220 aa  75.1  0.0000000000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  24.53 
 
 		 216 aa  75.1  0.0000000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  29.52 
 
 		 211 aa  74.7  0.0000000000007  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  30.05 
 
 		 204 aa  74.7  0.0000000000007  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  33.66 
 
 		 213 aa  72  0.000000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  30.92 
 
 		 207 aa  72.4  0.000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  31.25 
 
 		 209 aa  71.6  0.000000000006  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  33 
 
 		 204 aa  70.5  0.00000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  28.77 
 
 		 219 aa  70.9  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  31.88 
 
 		 209 aa  70.5  0.00000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  31.1 
 
 		 227 aa  69.3  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  30.99 
 
 		 215 aa  68.9  0.00000000004  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  27.75 
 
 		 213 aa  68.6  0.00000000006  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  34.98 
 
 		 212 aa  68.2  0.00000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  32.02 
 
 		 223 aa  68.2  0.00000000008  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  34.45 
 
 		 210 aa  66.6  0.0000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  33.17 
 
 		 206 aa  67  0.0000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  31.48 
 
 		 225 aa  66.6  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  26.44 
 
 		 209 aa  66.2  0.0000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  30.84 
 
 		 219 aa  66.6  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  31.02 
 
 		 226 aa  65.9  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  31.48 
 
 		 225 aa  65.9  0.0000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  29.22 
 
 		 218 aa  65.9  0.0000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  28.91 
 
 		 218 aa  65.5  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  37.31 
 
 		 212 aa  65.9  0.0000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  33.17 
 
 		 209 aa  65.5  0.0000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  27.4 
 
 		 212 aa  65.5  0.0000000005  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_002939  GSU1655  sensory box histidine kinase/response regulator  35.45 
 
 		 824 aa  65.1  0.0000000006  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  27.91 
 
 		 218 aa  65.1  0.0000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  26.37 
 
 		 209 aa  65.1  0.0000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  27.96 
 
 		 222 aa  64.7  0.0000000008  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  32.86 
 
 		 220 aa  64.7  0.0000000008  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  29.59 
 
 		 216 aa  64.3  0.0000000009  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  33.66 
 
 		 209 aa  64.7  0.0000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2882  two component LuxR family transcriptional regulator  29.95 
 
 		 226 aa  64.3  0.000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.533901  n/a   
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  30.88 
 
 		 211 aa  64.3  0.000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  27.54 
 
 		 207 aa  63.5  0.000000002  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  24.88 
 
 		 219 aa  63.5  0.000000002  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  31.34 
 
 		 209 aa  63.5  0.000000002  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_013595  Sros_7606  response regulator receiver protein  32.52 
 
 		 214 aa  63.5  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  37.5 
 
 		 228 aa  63.2  0.000000002  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  26.03 
 
 		 223 aa  63.5  0.000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  27.83 
 
 		 212 aa  63.2  0.000000002  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  30.66 
 
 		 216 aa  63.5  0.000000002  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009049  Rsph17029_1528  two component LuxR family transcriptional regulator  29.95 
 
 		 226 aa  63.5  0.000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0620794 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  27.96 
 
 		 216 aa  63.5  0.000000002  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  31.48 
 
 		 219 aa  63.2  0.000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  29.82 
 
 		 254 aa  62.8  0.000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  31.46 
 
 		 212 aa  62.8  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  35.61 
 
 		 201 aa  62.8  0.000000003  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal  1 
 
 
-
 
NC_009632  SaurJH1_1972  response regulator receiver  26.92 
 
 		 209 aa  62.8  0.000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  28.64 
 
 		 219 aa  62.8  0.000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  27.67 
 
 		 220 aa  62.8  0.000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_1938  two component LuxR family transcriptional regulator  26.92 
 
 		 209 aa  62.8  0.000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_0030  two component LuxR family transcriptional regulator  27.23 
 
 		 229 aa  62.8  0.000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  31.02 
 
 		 220 aa  62.4  0.000000004  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  29.86 
 
 		 220 aa  62.4  0.000000004  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  29.77 
 
 		 230 aa  62  0.000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  31.48 
 
 		 219 aa  62  0.000000005  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  26.34 
 
 		 207 aa  62  0.000000005  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  29.67 
 
 		 224 aa  62  0.000000005  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  29.13 
 
 		 209 aa  62  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  26.34 
 
 		 207 aa  62  0.000000005  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  30.41 
 
 		 224 aa  61.6  0.000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_007796  Mhun_2967  putative PAS/PAC sensor protein  31.69 
 
 		 376 aa  61.6  0.000000006  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  28.37 
 
 		 208 aa  61.6  0.000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.82 
 
 		 204 aa  61.6  0.000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  28.78 
 
 		 221 aa  61.6  0.000000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  30.85 
 
 		 220 aa  61.6  0.000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  23.92 
 
 		 214 aa  61.2  0.000000008  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_007796  Mhun_1607  response regulator receiver domain-containing protein  27.59 
 
 		 186 aa  61.2  0.000000009  Methanospirillum hungatei JF-1  Archaea  normal  1  normal  0.790082 
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  27.94 
 
 		 218 aa  61.2  0.000000009  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  32.68 
 
 		 207 aa  61.2  0.000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  22.64 
 
 		 218 aa  61.2  0.000000009  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  29.65 
 
 		 216 aa  61.2  0.00000001  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  26.55 
 
 		 228 aa  61.2  0.00000001  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  26.11 
 
 		 216 aa  60.5  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  29.7 
 
 		 211 aa  60.8  0.00000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  31.63 
 
 		 222 aa  60.8  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  29.11 
 
 		 219 aa  60.8  0.00000001  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  31.31 
 
 		 218 aa  60.8  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  29.61 
 
 		 220 aa  60.5  0.00000001  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  28.17 
 
 		 215 aa  60.8  0.00000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  28.37 
 
 		 210 aa  61.2  0.00000001  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  26.32 
 
 		 224 aa  60.5  0.00000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  28.5 
 
 		 213 aa  60.1  0.00000002  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  28.08 
 
 		 206 aa  60.1  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
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