More than 300 homologs were found in PanDaTox collection
for query gene PputW619_4403 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_58650  putative chemotaxis transducer  63.31 
 
 
673 aa  741    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5137  putative chemotaxis transducer  61.82 
 
 
673 aa  744    Pseudomonas aeruginosa PA7  Bacteria  normal  0.459514  n/a   
 
 
-
 
NC_007492  Pfl01_0789  chemotaxis sensory transducer  64.5 
 
 
676 aa  811    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.377611  normal  0.0840542 
 
 
-
 
NC_009439  Pmen_0782  methyl-accepting chemotaxis sensory transducer  62.87 
 
 
676 aa  733    Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_010501  PputW619_4403  methyl-accepting chemotaxis sensory transducer  100 
 
 
670 aa  1317    Pseudomonas putida W619  Bacteria  normal  0.604884  normal 
 
 
-
 
NC_008740  Maqu_0956  methyl-accepting chemotaxis sensory transducer  34.1 
 
 
676 aa  308  2.0000000000000002e-82  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  33.24 
 
 
679 aa  253  7e-66  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  47.17 
 
 
624 aa  249  1e-64  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
716 aa  240  6.999999999999999e-62  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  42.86 
 
 
712 aa  238  4e-61  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
638 aa  236  8e-61  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  42.59 
 
 
712 aa  234  3e-60  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
541 aa  233  7.000000000000001e-60  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  41.02 
 
 
713 aa  233  9e-60  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
541 aa  232  2e-59  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  45.45 
 
 
637 aa  228  3e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
543 aa  227  6e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  41.23 
 
 
642 aa  226  1e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_004349  SO_A0106  methyl-accepting chemotaxis protein  37.98 
 
 
546 aa  225  2e-57  Shewanella oneidensis MR-1  Bacteria  normal  0.827543  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
653 aa  224  3e-57  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_009656  PSPA7_3666  chemotaxis transducer  43.1 
 
 
541 aa  223  7e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.260935  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  39.83 
 
 
642 aa  223  9e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  41.12 
 
 
681 aa  223  9.999999999999999e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  41.91 
 
 
411 aa  221  1.9999999999999999e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  43.89 
 
 
674 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
636 aa  222  1.9999999999999999e-56  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  41.29 
 
 
548 aa  222  1.9999999999999999e-56  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
552 aa  222  1.9999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  42.54 
 
 
676 aa  221  3.9999999999999997e-56  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  40.56 
 
 
647 aa  219  8.999999999999998e-56  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  41.74 
 
 
553 aa  219  1e-55  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  42.51 
 
 
559 aa  219  1e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
564 aa  219  2e-55  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0712  chemotaxis sensory transducer  41.53 
 
 
541 aa  219  2e-55  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000566108  n/a   
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  42.66 
 
 
652 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
555 aa  218  2.9999999999999998e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_008463  PA14_43710  putative methyl-accepting chemotaxis transducer  42.25 
 
 
541 aa  218  2.9999999999999998e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0671  putative methyl-accepting chemotaxis sensory transducer  41.57 
 
 
531 aa  218  2.9999999999999998e-55  Saccharophagus degradans 2-40  Bacteria  normal  0.178659  hitchhiker  0.000000219808 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  38.87 
 
 
544 aa  218  4e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_07022  histidine kinase  41.4 
 
 
553 aa  218  4e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
541 aa  217  5e-55  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.16 
 
 
523 aa  217  5.9999999999999996e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
640 aa  217  7e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  38.32 
 
 
557 aa  217  7e-55  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
638 aa  216  8e-55  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0960  methyl-accepting chemotaxis sensory transducer  29.13 
 
 
666 aa  216  8e-55  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000181378  n/a   
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
541 aa  216  9e-55  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
638 aa  216  9.999999999999999e-55  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  41.87 
 
 
638 aa  216  9.999999999999999e-55  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
634 aa  215  1.9999999999999998e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
552 aa  215  1.9999999999999998e-54  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009512  Pput_0339  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
541 aa  215  1.9999999999999998e-54  Pseudomonas putida F1  Bacteria  normal  0.722367  normal 
 
 
-
 
NC_002947  PP_0317  methyl-accepting chemotaxis sensory transducer  39.61 
 
 
541 aa  214  3.9999999999999995e-54  Pseudomonas putida KT2440  Bacteria  normal  0.365849  decreased coverage  0.0000342214 
 
 
-
 
NC_009656  PSPA7_2443  putative chemotaxis transducer  43.08 
 
 
531 aa  214  3.9999999999999995e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  39.54 
 
 
640 aa  214  4.9999999999999996e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  47.56 
 
 
572 aa  214  5.999999999999999e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  38.14 
 
 
637 aa  213  5.999999999999999e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_007492  Pfl01_4833  chemotaxis sensory transducer  40.79 
 
 
541 aa  213  7e-54  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.000956827  normal  0.082646 
 
 
-
 
NC_011901  Tgr7_0157  methyl-accepting chemotaxis sensory transducer  42.34 
 
 
646 aa  213  7.999999999999999e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.805637  n/a   
 
 
-
 
NC_008345  Sfri_0861  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
542 aa  213  7.999999999999999e-54  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.54 
 
 
629 aa  213  1e-53  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  39.42 
 
 
541 aa  213  1e-53  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  38.73 
 
 
634 aa  212  2e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
647 aa  212  2e-53  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_007005  Psyr_2634  histidine kinase, HAMP region: chemotaxis sensory transducer  35.21 
 
 
542 aa  212  2e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.917034  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
541 aa  211  3e-53  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  37.16 
 
 
541 aa  211  5e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_010322  PputGB1_0340  methyl-accepting chemotaxis sensory transducer  40.17 
 
 
541 aa  211  5e-53  Pseudomonas putida GB-1  Bacteria  normal  0.582352  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  44 
 
 
647 aa  210  6e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_0391  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
499 aa  210  6e-53  Saccharophagus degradans 2-40  Bacteria  normal  0.0811848  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  38.3 
 
 
739 aa  210  7e-53  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
639 aa  210  7e-53  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  40.96 
 
 
541 aa  210  8e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  37.89 
 
 
541 aa  210  8e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  41.55 
 
 
650 aa  209  1e-52  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  41.94 
 
 
545 aa  208  2e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  39.1 
 
 
634 aa  208  2e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  36.8 
 
 
658 aa  208  2e-52  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  37.67 
 
 
634 aa  208  3e-52  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  37.68 
 
 
533 aa  208  3e-52  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2268  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
541 aa  208  3e-52  Pseudomonas putida GB-1  Bacteria  normal  0.255239  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
625 aa  207  4e-52  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_008463  PA14_48030  putative methyl-accepting chemotaxis transducer  41.92 
 
 
541 aa  207  4e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.478475 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
568 aa  207  4e-52  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  37.71 
 
 
653 aa  207  5e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_007005  Psyr_3351  histidine kinase, HAMP region: chemotaxis sensory transducer  35.26 
 
 
570 aa  207  5e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0540062  normal  0.0241334 
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  39.11 
 
 
541 aa  207  7e-52  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2471  methyl-accepting chemotaxis sensory transducer  41.34 
 
 
425 aa  206  9e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.817651  normal 
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  40.62 
 
 
539 aa  206  9e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  38.66 
 
 
560 aa  206  1e-51  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_011901  Tgr7_0445  putative methyl-accepting chemotaxis sensory transducer  40.35 
 
 
395 aa  206  1e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  41.34 
 
 
645 aa  206  1e-51  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_004578  PSPTO_3580  methyl-accepting chemotaxis protein  35.73 
 
 
546 aa  206  1e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  38.38 
 
 
628 aa  206  1e-51  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
638 aa  206  1e-51  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  41.16 
 
 
564 aa  206  1e-51  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_007492  Pfl01_3768  chemotaxis sensory transducer  45.67 
 
 
560 aa  206  1e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  42.77 
 
 
738 aa  206  1e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  42.73 
 
 
714 aa  206  1e-51  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_008463  PA14_28050  putative chemotaxis transducer  41.85 
 
 
531 aa  206  1e-51  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.652078  normal 
 
 
-
 
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