| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0445 |
|---|
| Symbol | |
|---|
| ID | 7317275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 470819 |
|---|
| End bp | 472006 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643615329 |
|---|
| Product | putative methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002512530 |
|---|
| Protein GI | 220933631 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGCA AACCCAGCAT CCTGCGCAAC CTGCTCCTGG CCTTTCTCGG CTTCGGCCTG
GTCCTGGGGC TGCTGTTCCC GTTCTTCGCC GACCTGTTCG TGGAATGGAA GCCTGGCATG
TACGGCCTGT TCTTCGCCGC CTCCATCGCG GCCGGCCTGG TCATGGGCGG GGTCAACTAC
CTGCTGGTGC GGGTGATCCT GCTGGCGCGC CTGCGGCGCA TCGCCGAGGT GACCCATGCC
ATCAGCGAGA ACGACATCTC CCTGAACTGC ACCATGCAGA GCCACGACCT GATCGGCGAG
CTGATCGACA GCTTCAACCG CATGGCCGGG AACCTGCGTG GCATGATCCG CCTGATCAGC
GCCAACAGCG AGCAGCTGGC CGGCTCCGCC AATCGGCTGG TGAGCATCAT CGGCGAGACC
GGCCGCGACC AGGGTCATCA GCGTGACGCC ACCACCCTGG TGGCCACCGC CATGAACCAG
ATGGCCGCCA CGGTGCGCGA GGTGGCCGCC AACACCCAGG GCGCCGCCGA GGCGGCCTCC
ACCGCCGCCG GCGAGGCACA GAACGGCGCG CTGACCGCCA CCGAGGCCCT GGGGGCCATC
GGCAACCTCA ACGCCGGCAT CCAGCGGGCC GTGGGCGTGA TCGACAAGGT GCGCGCGGAA
AACGACCGCA TCCGCTCGGT GCTGGACGTG ATCCAGGGCA TCAGCGAACA GACCAACCTG
CTGGCACTGA ACGCTGCCAT CGAGGCGGCC CGCGCCGGCG AACAGGGCCG CGGCTTTGCC
GTGGTGGCCG ACGAGGTGCG CAACCTGGCC CGGCGGACCC AGGACTCCGC CCGTGAGATT
CAGAACATGC TCAGCCGACT CAATGACCAG GTGCAGGCCG CCGTGGACGT GATGGGCGAG
GCCAACGCAA AGGCCGCCGA GAGCGAGGAA AAGGTGGAGG AATCCGCCAT GGCCCTGGGC
GAGATCGCCG GTGCCATCAA GTCCATCGAG CAGATGAACA TCCAGATCGC CACTGCCGCC
GAACAACAGA CCGCCGTGGC CGAGGACATC AACCGCAACA TCATCGAGAT CAACGACGCC
GCCGAGCGCG GCGTGCAGTC CATGCACCAG GCCCAGGAAT CCACCGGCGA ACTCAACGAG
GTGGCCGGCC AGCTGCGTGA GATCGTGGGG CGGTTCAAAC TCAACTGA
|
|---|
| Protein sequence | MFRKPSILRN LLLAFLGFGL VLGLLFPFFA DLFVEWKPGM YGLFFAASIA AGLVMGGVNY
LLVRVILLAR LRRIAEVTHA ISENDISLNC TMQSHDLIGE LIDSFNRMAG NLRGMIRLIS
ANSEQLAGSA NRLVSIIGET GRDQGHQRDA TTLVATAMNQ MAATVREVAA NTQGAAEAAS
TAAGEAQNGA LTATEALGAI GNLNAGIQRA VGVIDKVRAE NDRIRSVLDV IQGISEQTNL
LALNAAIEAA RAGEQGRGFA VVADEVRNLA RRTQDSAREI QNMLSRLNDQ VQAAVDVMGE
ANAKAAESEE KVEESAMALG EIAGAIKSIE QMNIQIATAA EQQTAVAEDI NRNIIEINDA
AERGVQSMHQ AQESTGELNE VAGQLREIVG RFKLN
|
|---|
| |