More than 300 homologs were found in PanDaTox collection
for query gene Bfae_27130 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_27130  short-chain dehydrogenase of unknown substrate specificity  100 
 
 
258 aa  513  1e-144  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_19470  short-chain dehydrogenase of unknown substrate specificity  53.94 
 
 
287 aa  243  1.9999999999999999e-63  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  51.97 
 
 
255 aa  233  2.0000000000000002e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  51.03 
 
 
249 aa  224  8e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  50.99 
 
 
250 aa  224  9e-58  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  48.37 
 
 
253 aa  220  1.9999999999999999e-56  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  48.56 
 
 
269 aa  215  7e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  47.97 
 
 
249 aa  214  9.999999999999999e-55  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  52.96 
 
 
250 aa  213  1.9999999999999998e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  48.79 
 
 
252 aa  212  4.9999999999999996e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_013172  Bfae_25790  short-chain dehydrogenase of unknown substrate specificity  45.97 
 
 
282 aa  211  7.999999999999999e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3148  short-chain dehydrogenase/reductase SDR  49.2 
 
 
259 aa  210  2e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  49.03 
 
 
276 aa  210  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  48.39 
 
 
269 aa  207  2e-52  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  49.61 
 
 
254 aa  205  5e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  45.67 
 
 
269 aa  202  4e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  45.76 
 
 
258 aa  198  6e-50  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  47.58 
 
 
269 aa  197  1.0000000000000001e-49  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  43.98 
 
 
263 aa  196  4.0000000000000005e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011879  Achl_3992  short-chain dehydrogenase/reductase SDR  43.15 
 
 
251 aa  195  5.000000000000001e-49  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.608737 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  48.37 
 
 
253 aa  192  7e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  44.53 
 
 
259 aa  190  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  43.62 
 
 
296 aa  190  2e-47  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  44.49 
 
 
258 aa  182  6e-45  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  43.92 
 
 
258 aa  172  3.9999999999999995e-42  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  44.49 
 
 
258 aa  170  2e-41  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  44.49 
 
 
258 aa  170  2e-41  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  44.49 
 
 
258 aa  170  2e-41  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  47.11 
 
 
259 aa  168  9e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  44.44 
 
 
265 aa  162  4.0000000000000004e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  39.84 
 
 
266 aa  159  3e-38  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  40.44 
 
 
265 aa  155  4e-37  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  41.96 
 
 
258 aa  154  1e-36  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  43.11 
 
 
265 aa  153  2.9999999999999998e-36  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  38.17 
 
 
267 aa  151  8e-36  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  39.73 
 
 
264 aa  147  1.0000000000000001e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  41.78 
 
 
264 aa  147  2.0000000000000003e-34  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  41.07 
 
 
262 aa  147  2.0000000000000003e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  41.07 
 
 
262 aa  145  5e-34  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  37.61 
 
 
270 aa  145  7.0000000000000006e-34  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.54 
 
 
263 aa  144  1e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  40.68 
 
 
258 aa  144  1e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  39.11 
 
 
264 aa  144  2e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  37.75 
 
 
266 aa  143  2e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  36.21 
 
 
266 aa  144  2e-33  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  37.7 
 
 
266 aa  143  3e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  37.78 
 
 
267 aa  142  5e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  37.33 
 
 
270 aa  142  6e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  38.28 
 
 
281 aa  141  9.999999999999999e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  38.28 
 
 
281 aa  141  9.999999999999999e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  40.62 
 
 
263 aa  140  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  39.09 
 
 
255 aa  140  3e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  38.78 
 
 
266 aa  139  3e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  36.02 
 
 
257 aa  139  3.9999999999999997e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  38.37 
 
 
266 aa  139  3.9999999999999997e-32  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  38.93 
 
 
273 aa  139  4.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  40 
 
 
271 aa  139  4.999999999999999e-32  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  37.7 
 
 
266 aa  139  6e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  36.9 
 
 
262 aa  138  7e-32  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  41.33 
 
 
271 aa  137  1e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  34.66 
 
 
263 aa  137  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.6 
 
 
264 aa  137  2e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  37.5 
 
 
266 aa  136  3.0000000000000003e-31  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  37.05 
 
 
264 aa  134  9.999999999999999e-31  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  38 
 
 
291 aa  134  9.999999999999999e-31  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  34.41 
 
 
267 aa  134  1.9999999999999998e-30  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  37.96 
 
 
266 aa  133  1.9999999999999998e-30  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  36.43 
 
 
267 aa  133  3e-30  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  39.56 
 
 
268 aa  132  6e-30  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  35.95 
 
 
259 aa  132  6e-30  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  34.55 
 
 
271 aa  132  6.999999999999999e-30  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  38.67 
 
 
266 aa  131  1.0000000000000001e-29  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0353  short chain dehydrogenase/reductase family oxidoreductase  28.97 
 
 
265 aa  131  1.0000000000000001e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  0.45647  n/a   
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  36.61 
 
 
266 aa  130  2.0000000000000002e-29  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  36.36 
 
 
267 aa  129  5.0000000000000004e-29  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  36 
 
 
265 aa  129  6e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  36.73 
 
 
269 aa  128  8.000000000000001e-29  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  27.89 
 
 
265 aa  128  9.000000000000001e-29  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  32.42 
 
 
260 aa  128  1.0000000000000001e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  36.52 
 
 
266 aa  127  2.0000000000000002e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_014211  Ndas_5378  short-chain dehydrogenase/reductase SDR  35.8 
 
 
277 aa  126  3e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  34.53 
 
 
260 aa  126  3e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  39.2 
 
 
271 aa  126  3e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  35.56 
 
 
265 aa  126  4.0000000000000003e-28  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  36.91 
 
 
267 aa  126  4.0000000000000003e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  38.1 
 
 
262 aa  125  5e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  32.68 
 
 
255 aa  125  7e-28  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  35.34 
 
 
268 aa  125  9e-28  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  38.22 
 
 
270 aa  124  2e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_013522  Taci_1655  short-chain dehydrogenase/reductase SDR  33.2 
 
 
272 aa  124  2e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  34.55 
 
 
275 aa  123  3e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  34.98 
 
 
262 aa  123  4e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  38.68 
 
 
264 aa  122  4e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  35.4 
 
 
271 aa  122  4e-27  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  34.8 
 
 
268 aa  122  5e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  36.77 
 
 
260 aa  122  6e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  35.84 
 
 
269 aa  122  6e-27  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  36.57 
 
 
261 aa  122  7e-27  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  39.11 
 
 
269 aa  122  8e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  36.8 
 
 
262 aa  122  8e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
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