More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1341 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  100 
 
 
268 aa  543  1e-153  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2545  short-chain dehydrogenase/reductase SDR  67.16 
 
 
268 aa  369  1e-101  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.522448  normal 
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  65.67 
 
 
268 aa  362  4e-99  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  66.42 
 
 
268 aa  354  6.999999999999999e-97  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  64.93 
 
 
268 aa  354  8.999999999999999e-97  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  66.04 
 
 
268 aa  353  2e-96  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  66.04 
 
 
268 aa  353  2e-96  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  65.1 
 
 
255 aa  332  3e-90  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_014158  Tpau_0582  short-chain dehydrogenase/reductase SDR  50.76 
 
 
266 aa  251  7e-66  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  42.01 
 
 
273 aa  187  1e-46  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  42.25 
 
 
267 aa  180  2e-44  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  39.47 
 
 
267 aa  166  4e-40  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  40.23 
 
 
262 aa  164  2.0000000000000002e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  39.03 
 
 
267 aa  161  1e-38  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  39.03 
 
 
267 aa  161  1e-38  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  37.4 
 
 
262 aa  156  3e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  39.11 
 
 
258 aa  149  5e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  38.78 
 
 
266 aa  145  6e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  36.9 
 
 
266 aa  142  6e-33  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  37.65 
 
 
258 aa  141  9e-33  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  37.4 
 
 
262 aa  141  9e-33  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  34.25 
 
 
256 aa  140  1.9999999999999998e-32  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  39.68 
 
 
259 aa  140  3e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  38.1 
 
 
255 aa  139  6e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  36.73 
 
 
266 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  32.56 
 
 
258 aa  135  5e-31  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  37.98 
 
 
289 aa  134  9.999999999999999e-31  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  31.78 
 
 
259 aa  134  9.999999999999999e-31  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  40.17 
 
 
259 aa  134  9.999999999999999e-31  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  36.86 
 
 
258 aa  134  1.9999999999999998e-30  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  35.74 
 
 
253 aa  134  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_002947  PP_0429  short chain dehydrogenase/reductase family oxidoreductase  36.47 
 
 
260 aa  132  6.999999999999999e-30  Pseudomonas putida KT2440  Bacteria  normal  normal  0.406504 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.13 
 
 
263 aa  132  7.999999999999999e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  37.25 
 
 
259 aa  132  7.999999999999999e-30  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0462  short-chain dehydrogenase/reductase SDR  36.47 
 
 
260 aa  132  7.999999999999999e-30  Pseudomonas putida F1  Bacteria  normal  0.767614  hitchhiker  0.00534124 
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  32.03 
 
 
258 aa  131  9e-30  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  33.08 
 
 
261 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  33.6 
 
 
264 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  31.01 
 
 
259 aa  130  2.0000000000000002e-29  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_0459  short-chain dehydrogenase/reductase SDR  36.08 
 
 
260 aa  130  2.0000000000000002e-29  Pseudomonas putida GB-1  Bacteria  normal  normal  0.240703 
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  35.14 
 
 
265 aa  130  2.0000000000000002e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  38.33 
 
 
267 aa  130  3e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  39.39 
 
 
271 aa  129  5.0000000000000004e-29  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  32.71 
 
 
261 aa  129  6e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  33.72 
 
 
267 aa  129  7.000000000000001e-29  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  33.85 
 
 
269 aa  128  8.000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  31.15 
 
 
264 aa  128  8.000000000000001e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  33.46 
 
 
257 aa  127  1.0000000000000001e-28  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  35.83 
 
 
258 aa  127  2.0000000000000002e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  32.03 
 
 
257 aa  127  2.0000000000000002e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  36.43 
 
 
259 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  37.65 
 
 
259 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  34.66 
 
 
259 aa  126  3e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  35.15 
 
 
298 aa  126  4.0000000000000003e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  35.39 
 
 
258 aa  125  6e-28  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  35.39 
 
 
258 aa  125  6e-28  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  35.55 
 
 
263 aa  125  7e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  37.04 
 
 
266 aa  125  7e-28  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  35.69 
 
 
259 aa  125  9e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  34.24 
 
 
253 aa  125  9e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4774  short-chain dehydrogenase/reductase SDR  35.69 
 
 
260 aa  124  1e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.45506 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  34.1 
 
 
260 aa  125  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  34.83 
 
 
259 aa  124  1e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  35.94 
 
 
294 aa  124  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  33.85 
 
 
269 aa  124  1e-27  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  34.55 
 
 
252 aa  123  3e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  34.98 
 
 
258 aa  122  4e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  38.6 
 
 
256 aa  123  4e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  35.8 
 
 
291 aa  122  4e-27  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  33.46 
 
 
262 aa  123  4e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  34.72 
 
 
275 aa  122  6e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  35.07 
 
 
260 aa  122  7e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  42.16 
 
 
264 aa  121  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  34.68 
 
 
249 aa  121  9.999999999999999e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_008726  Mvan_0661  short-chain dehydrogenase/reductase SDR  35.92 
 
 
258 aa  121  9.999999999999999e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.381329 
 
 
-
 
NC_008254  Meso_3522  short-chain dehydrogenase/reductase SDR  33.33 
 
 
289 aa  120  1.9999999999999998e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  34.92 
 
 
258 aa  120  3e-26  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  34.11 
 
 
262 aa  120  3e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  32.94 
 
 
264 aa  120  3e-26  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  30.04 
 
 
256 aa  120  3e-26  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  34.11 
 
 
262 aa  120  3e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  34.77 
 
 
296 aa  119  3.9999999999999996e-26  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  34.6 
 
 
262 aa  119  3.9999999999999996e-26  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_007925  RPC_1224  short-chain dehydrogenase/reductase SDR  36.95 
 
 
261 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.000362575 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  34.69 
 
 
275 aa  119  7e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  39.46 
 
 
258 aa  118  7.999999999999999e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  38.83 
 
 
264 aa  117  9.999999999999999e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  35.81 
 
 
271 aa  118  9.999999999999999e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  40.3 
 
 
267 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  33.87 
 
 
250 aa  118  9.999999999999999e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  35.68 
 
 
270 aa  118  9.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  34 
 
 
258 aa  118  9.999999999999999e-26  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  33.46 
 
 
269 aa  118  9.999999999999999e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  34.25 
 
 
276 aa  118  9.999999999999999e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  27.56 
 
 
262 aa  117  1.9999999999999998e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6514  short-chain dehydrogenase/reductase SDR  35.27 
 
 
250 aa  117  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  0.757683  normal  0.645684 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  34.41 
 
 
286 aa  116  3e-25  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  37.9 
 
 
256 aa  117  3e-25  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  41.33 
 
 
271 aa  116  3.9999999999999997e-25  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  30.52 
 
 
260 aa  116  3.9999999999999997e-25  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
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