More than 300 homologs were found in PanDaTox collection
for query gene Acid345_0398 on replicon NC_008009
Organism: Candidatus Koribacter versatilis Ellin345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008009  Acid345_0398  response regulator receiver protein  100 
 
 
127 aa  259  8.999999999999999e-69  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.378909 
 
 
-
 
NC_008009  Acid345_2233  response regulator receiver protein  60.68 
 
 
131 aa  144  4.0000000000000006e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.250128  normal  0.471472 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  43.7 
 
 
232 aa  93.6  9e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0467  response regulator receiver protein  41.94 
 
 
122 aa  92  3e-18  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0748  response regulator receiver protein  39.34 
 
 
123 aa  91.7  3e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.390262  normal  0.11236 
 
 
-
 
NC_008312  Tery_3248  response regulator receiver protein  39.83 
 
 
121 aa  91.3  4e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.500247 
 
 
-
 
NC_013385  Adeg_1897  two component transcriptional regulator, winged helix family  43.22 
 
 
229 aa  90.9  5e-18  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1537  two component LuxR family transcriptional regulator  38.21 
 
 
242 aa  90.9  6e-18  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_008819  NATL1_02441  two-component response regulator  38.21 
 
 
242 aa  90.9  6e-18  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.72299  normal 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  42.28 
 
 
228 aa  89.7  1e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_007516  Syncc9605_2427  two component LuxR family transcriptional regulator  41.38 
 
 
245 aa  89.7  1e-17  Synechococcus sp. CC9605  Bacteria  normal  0.27075  normal 
 
 
-
 
NC_009486  Tpet_0452  response regulator receiver protein  41.13 
 
 
122 aa  90.1  1e-17  Thermotoga petrophila RKU-1  Bacteria  normal  0.17051  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  41.18 
 
 
231 aa  89  2e-17  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009976  P9211_01871  two-component response regulator  39.67 
 
 
242 aa  89.4  2e-17  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_1554  two component transcriptional regulator, winged helix family  39.83 
 
 
229 aa  89  2e-17  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00709514 
 
 
-
 
NC_011729  PCC7424_3000  response regulator receiver protein  38.98 
 
 
124 aa  89  2e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007513  Syncc9902_2107  two component LuxR family transcriptional regulator  40.52 
 
 
245 aa  88.6  3e-17  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1246  CheA signal transduction histidine kinases  38.21 
 
 
1643 aa  88.6  3e-17  Methylobacillus flagellatus KT  Bacteria  normal  0.0708097  normal  0.755815 
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  41.53 
 
 
234 aa  88.2  3e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_014248  Aazo_4952  response regulator receiver protein  40.17 
 
 
121 aa  88.2  4e-17  'Nostoc azollae' 0708  Bacteria  normal  0.699568  n/a   
 
 
-
 
NC_013595  Sros_1560  response regulator receiver protein  38.46 
 
 
129 aa  87.4  6e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0508  response regulator receiver domain-containing protein  39.32 
 
 
121 aa  87  7e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.481314  normal 
 
 
-
 
NC_009012  Cthe_1805  response regulator receiver modulated diguanylate cyclase  37.7 
 
 
310 aa  87  7e-17  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0638722  n/a   
 
 
-
 
NC_010505  Mrad2831_3565  response regulator receiver protein  40.98 
 
 
126 aa  87  8e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0960945  normal 
 
 
-
 
NC_009428  Rsph17025_1924  two component transcriptional regulator  39.34 
 
 
230 aa  86.7  9e-17  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal  0.399122 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  42.52 
 
 
229 aa  86.7  9e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  41.53 
 
 
231 aa  86.7  1e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_014165  Tbis_0845  response regulator receiver protein  38.46 
 
 
125 aa  86.7  1e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.455865  normal  0.167506 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  40.34 
 
 
235 aa  86.7  1e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  38.21 
 
 
228 aa  86.3  1e-16  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_007908  Rfer_1375  CheA signal transduction histidine kinases  36.67 
 
 
1888 aa  86.3  1e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  38.21 
 
 
230 aa  86.3  1e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_011726  PCC8801_1234  response regulator receiver protein  38.98 
 
 
122 aa  85.9  2e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008820  P9303_27181  two-component response regulator  38.32 
 
 
233 aa  85.5  2e-16  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  43.22 
 
 
237 aa  85.5  2e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_013161  Cyan8802_1264  response regulator receiver protein  38.98 
 
 
122 aa  85.9  2e-16  Cyanothece sp. PCC 8802  Bacteria  normal  0.0578681  hitchhiker  0.00155192 
 
 
-
 
NC_007493  RSP_2599  phosphate regulon transcriptional regulator, PhoR  38.52 
 
 
230 aa  85.1  3e-16  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3747  response regulator receiver protein  34.75 
 
 
121 aa  85.1  3e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1257  two component transcriptional regulator  38.52 
 
 
230 aa  85.1  3e-16  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.621627  normal 
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  37.5 
 
 
235 aa  84.7  4e-16  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_007912  Sde_3629  putative CheA signal transduction histidine kinases  39.6 
 
 
2336 aa  84.7  4e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  40.17 
 
 
229 aa  84.3  5e-16  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  38.14 
 
 
228 aa  84.3  5e-16  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  39.84 
 
 
239 aa  84  6e-16  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  39.84 
 
 
239 aa  84  6e-16  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  34.19 
 
 
234 aa  84  7e-16  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  40.68 
 
 
226 aa  83.6  8e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0905  two component transcriptional regulator  37.82 
 
 
238 aa  83.2  0.000000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2472  response regulator receiver protein  40.17 
 
 
216 aa  83.2  0.000000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3017  CheA signal transduction histidine kinases  37.61 
 
 
1983 aa  82.8  0.000000000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  42.28 
 
 
229 aa  82.8  0.000000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_010511  M446_3554  response regulator receiver protein  43.14 
 
 
125 aa  82.8  0.000000000000001  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0426067 
 
 
-
 
NC_009718  Fnod_0092  response regulator receiver protein  35.29 
 
 
120 aa  82.4  0.000000000000002  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  39.5 
 
 
230 aa  82.4  0.000000000000002  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  37.29 
 
 
226 aa  82.4  0.000000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_010002  Daci_1576  CheA signal transduction histidine kinase  36.79 
 
 
2137 aa  82.4  0.000000000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.167147  normal  0.557453 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  41.46 
 
 
230 aa  82  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  39.17 
 
 
272 aa  82  0.000000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_007498  Pcar_1409  two component signal transduction response regulator  37.38 
 
 
123 aa  81.6  0.000000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000120114  n/a   
 
 
-
 
NC_007777  Francci3_0978  two component transcriptional regulator  41.51 
 
 
321 aa  82  0.000000000000003  Frankia sp. CcI3  Bacteria  normal  0.323902  normal 
 
 
-
 
NC_007948  Bpro_1140  CheA signal transduction histidine kinases  37.07 
 
 
2070 aa  81.6  0.000000000000003  Polaromonas sp. JS666  Bacteria  normal  normal  0.607614 
 
 
-
 
NC_008312  Tery_0954  two component transcriptional regulator  40.5 
 
 
243 aa  81.6  0.000000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0817018 
 
 
-
 
NC_007347  Reut_A2619  response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt  33.06 
 
 
1956 aa  81.3  0.000000000000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  37.4 
 
 
228 aa  81.6  0.000000000000004  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_008782  Ajs_3574  CheA signal transduction histidine kinases  37.74 
 
 
2026 aa  81.3  0.000000000000004  Acidovorax sp. JS42  Bacteria  normal  0.906934  normal  0.231875 
 
 
-
 
NC_011992  Dtpsy_2897  CheA signal transduction histidine kinase  37.74 
 
 
2026 aa  81.3  0.000000000000004  Acidovorax ebreus TPSY  Bacteria  normal  0.855039  n/a   
 
 
-
 
NC_013161  Cyan8802_2780  response regulator receiver protein  36.44 
 
 
121 aa  80.9  0.000000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.76051 
 
 
-
 
NC_012791  Vapar_4622  CheA signal transduction histidine kinase  36.79 
 
 
2022 aa  81.3  0.000000000000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_3337  response regulator receiver protein  36.44 
 
 
121 aa  80.9  0.000000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008781  Pnap_3350  CheA signal transduction histidine kinases  34.96 
 
 
1970 aa  80.9  0.000000000000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1453  two component transcriptional regulator  40.16 
 
 
244 aa  80.9  0.000000000000006  Synechococcus elongatus PCC 7942  Bacteria  normal  0.952418  normal  0.0249242 
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  38.46 
 
 
230 aa  80.9  0.000000000000006  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5055  two component transcriptional regulator  41.03 
 
 
223 aa  80.5  0.000000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1257  two component transcriptional regulator  37.5 
 
 
229 aa  80.5  0.000000000000007  Ruegeria sp. TM1040  Bacteria  normal  0.536699  normal 
 
 
-
 
NC_008817  P9515_01981  two-component response regulator  38.53 
 
 
242 aa  80.5  0.000000000000007  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.125891  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  36.67 
 
 
229 aa  80.5  0.000000000000008  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  37.29 
 
 
229 aa  80.5  0.000000000000008  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_003909  BCE_5379  DNA-binding response regulator  44.12 
 
 
223 aa  80.1  0.000000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4944  DNA-binding response regulator  44.12 
 
 
223 aa  80.1  0.000000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0109954  n/a   
 
 
-
 
NC_006274  BCZK4959  DNA-binding response regulator  44.12 
 
 
223 aa  80.1  0.000000000000009  Bacillus cereus E33L  Bacteria  hitchhiker  0.000160223  n/a   
 
 
-
 
NC_009921  Franean1_1003  response regulator receiver protein  38.32 
 
 
128 aa  80.1  0.000000000000009  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A5433  DNA-binding response regulator  44.12 
 
 
223 aa  80.1  0.000000000000009  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5353  DNA-binding response regulator  44.12 
 
 
223 aa  80.1  0.000000000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  34.15 
 
 
238 aa  79.7  0.00000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  40.65 
 
 
225 aa  80.1  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_010172  Mext_4215  response regulator receiver  42.16 
 
 
124 aa  79.7  0.00000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.0783308  normal  0.412692 
 
 
-
 
NC_007404  Tbd_2548  CheA Signal transduction histidine Kinases (STHK)  33.33 
 
 
1960 aa  79.7  0.00000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.798517  normal 
 
 
-
 
NC_010725  Mpop_4732  response regulator receiver protein  42.16 
 
 
133 aa  80.1  0.00000000000001  Methylobacterium populi BJ001  Bacteria  normal  0.788518  decreased coverage  0.0029072 
 
 
-
 
NC_011757  Mchl_4585  response regulator receiver protein  42.16 
 
 
124 aa  79.7  0.00000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0945273  normal  0.0607582 
 
 
-
 
NC_007604  Synpcc7942_1860  two component LuxR family transcriptional regulator  35.59 
 
 
235 aa  80.1  0.00000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0905  CheA signal transduction histidine kinase  35.78 
 
 
2164 aa  79.7  0.00000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.384813 
 
 
-
 
NC_013510  Tcur_3942  response regulator receiver protein  34.45 
 
 
163 aa  80.1  0.00000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  37.5 
 
 
236 aa  79.3  0.00000000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  38.46 
 
 
230 aa  79.7  0.00000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  36.44 
 
 
239 aa  79.3  0.00000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  43.22 
 
 
233 aa  80.1  0.00000000000001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3413  two component transcriptional regulator  37.29 
 
 
252 aa  79.7  0.00000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.427436 
 
 
-
 
NC_013161  Cyan8802_3719  response regulator receiver protein  39.29 
 
 
123 aa  79  0.00000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  0.173125  normal  0.315103 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  38.46 
 
 
230 aa  79  0.00000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_007794  Saro_2281  two component transcriptional regulator  36.97 
 
 
229 aa  79.3  0.00000000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331932  n/a   
 
 
-
 
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