| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_1860 |
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| Symbol | |
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| ID | 3775223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 1930475 |
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| End bp | 1931182 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637800301 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_400877 |
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| Protein GI | 81300669 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAG CTGTGAGCGA CGCCGAGATC CTGTTAGTCG ATGATGAGCC TGGACTGCGT
GAAGCCGTTC AAGCCTATTT AGAAGACAGT GGCTTTCGAG TGCGCACAGC TGCCAATGCC
CAAGAGGGTT GGGAGCAACT TCAGCAAGCC CGTCCTGATT TGGTGATCAC TGATGTGATG
ATGCCTCGGG TTGACGGCTA TCAGTTTTTG GCTCAGCTGC GAGGTGATGA TCGCTTCAAG
GCTTTGCCAG TGATTTTGCT GACAGCGCGG GGGATGACGG GCGATCGCAT CCAAGGTTAT
GAAGCGGGCT GTGATGACTA CATTGCCAAG CCCTTCGATC CAGATGAACT GGTGGTACGG
GTCGAGAACC TGCTGCGCCG GCGCCGAGAA ACGATCGCGG CTGTTGCTGA CACGGGTAAT
CCTGACTTAG CGGAAGTTGC GCGACAAGTC GCAGAAATTC GAGCCATGCT CCAGCAGAAG
CCGCAGTTGC AAACGCAGGC CACACCGCTC GCCCTGGACC TCACCCCTCG CGAAGAAAGT
GTTTTGAAAT TGGTTGCTCA GGGCTTGATG AACAAAGAAA TTGCCCGAGA ACTCGATACC
AGTGTGCGCA ACATTGAAAA ATACGTCAGC AGGTTGTTCA GTAAGACAGG CACCAACAGC
CGCACAGAAT TGGTGCGCTT TTCGCTAGAG CATGGCCTAG CTGATTGA
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| Protein sequence | MEQAVSDAEI LLVDDEPGLR EAVQAYLEDS GFRVRTAANA QEGWEQLQQA RPDLVITDVM
MPRVDGYQFL AQLRGDDRFK ALPVILLTAR GMTGDRIQGY EAGCDDYIAK PFDPDELVVR
VENLLRRRRE TIAAVADTGN PDLAEVARQV AEIRAMLQQK PQLQTQATPL ALDLTPREES
VLKLVAQGLM NKEIARELDT SVRNIEKYVS RLFSKTGTNS RTELVRFSLE HGLAD
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