Gene Noc_2401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2401 
Symbol 
ID3704654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2750894 
End bp2751583 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content56% 
IMG OID637738884 
Productphosphate regulon transcriptional regulatory protein phoB 
Protein accessionYP_344389 
Protein GI77165864 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCAA CCATATTAGT CGTTGATGAC GAAGCTGCAA TTCGCGAAAT GCTGGGGTTT 
GCCCTTACCC AGGAAGGTTA TTATTATCAG GCGGCTGCCG ATGGGGAGCA GGCCTGGCAG
CGGATAAACG AGTCTCACCC GGATCTCATT TTGCTAGATT GGATGTTGCC GGGGATCAGC
GGGGTGGATT TAGCCCGCCG CCTTAAGCGG GAACCCAGTA CGCGAGAGCT CCCTGTGATC
ATGCTAACCG CCCGCGATGA AGAGGAAGAT AAGGTCCGGG GGCTCAATGT GGGCGCCGAC
GATTATATTA CCAAGCCCTT TTCACCAACG GAGCTGATAG CCCGTATAAA AGCGGTACTG
CGGCGGAGCG CCCCATTGGC CAGCGGGGAA GTGATTGAAT TCGACGGGCT AAAACTTGAT
CCGGGCAGCC ATCGGTTAAG CGTGAGGGGC ACTCCTCTGG AGATGGGGCC CACCGAGTTT
CGCCTGCTCC ACTTTTTCCT TACTCACCTG GAGCGGGTCT ATAGCCGGGG TCAGCTGATT
GATTACGTCT GGGGAGACAA TGTGTATGTA GAGGAACGCA CAGTGGATGT TCATATCCGC
CGTTTGCGCA AATCCTTGGA GCCGAGCGGC CATGACGGGT TTATCCAAAC CGTGCGGGGC
GTAGGGTACC GATTTTCTAA TCGTTCCTAA
 
Protein sequence
MVATILVVDD EAAIREMLGF ALTQEGYYYQ AAADGEQAWQ RINESHPDLI LLDWMLPGIS 
GVDLARRLKR EPSTRELPVI MLTARDEEED KVRGLNVGAD DYITKPFSPT ELIARIKAVL
RRSAPLASGE VIEFDGLKLD PGSHRLSVRG TPLEMGPTEF RLLHFFLTHL ERVYSRGQLI
DYVWGDNVYV EERTVDVHIR RLRKSLEPSG HDGFIQTVRG VGYRFSNRS