Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_1537 |
Symbol | |
ID | 3606935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 207242 |
End bp | 207970 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637688415 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_292728 |
Protein GI | 72383373 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGACC CCAATCCATC AACACAAGAA GTTTCTCAAA CTCCAAGGAT ATTACTTGTC GATGACGAAC CCGGTTTAAG AACTGCTGTT CAGGCCTATC TTGAAGATGA AGGATTTCAA GTTACAACCG CTGTCGATGG AGAAGAGGGA TGGGAAAAAG CTCAAAAAAT GATCCCTGAT GTAATTATCA GTGACGTCAT GATGCCTAGA TGTGATGGTT ATGGGCTTTT AAAAAAAATT AGAGAAGATG AAAGACTTGG AGGTACACCT GTCATTTTCC TTACTGCTAA AGGTATGACT GCTGATAGGA CTCAGGGTTA TCAAGCGGGT GTAGACGATT ACATGCCAAA ACCATTTGAT CCAGATGAGC TAGTTGCAAG AGTTAAGAAT GTAGTTCAGC GGCAAGAGCG ACTATTAACT GAAGCAGCCA GATTTGCTAA TGCTGATGTT GGCCAAATGG CAAAACAGAT TACAGAAATA AAATCAATGC TTAGCCATGG GGATAAAAAC CACTCACGCA AAGATGATTC GATTCCTAAT TTCACCCCAA GAGAGGCAAG CGTTTTGCAA CTAGTAGCGG AAGGTTTAAT GAACAAAGAA ATTGCAAGAC AACTTGAGAC TTCTATCCGC AATGTAGAGA AATATGTGAG TCGATTATTT ATTAAAACCG GTACTTCCAG TAGAACAGAA CTAGTTAGAT ATGCACTTGA AAATCATTTA GTTACCTAA
|
Protein sequence | MSDPNPSTQE VSQTPRILLV DDEPGLRTAV QAYLEDEGFQ VTTAVDGEEG WEKAQKMIPD VIISDVMMPR CDGYGLLKKI REDERLGGTP VIFLTAKGMT ADRTQGYQAG VDDYMPKPFD PDELVARVKN VVQRQERLLT EAARFANADV GQMAKQITEI KSMLSHGDKN HSRKDDSIPN FTPREASVLQ LVAEGLMNKE IARQLETSIR NVEKYVSRLF IKTGTSSRTE LVRYALENHL VT
|
| |