Gene Franean1_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1003 
Symbol 
ID5675669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1183196 
End bp1183582 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content67% 
IMG OID641239932 
Productresponse regulator receiver protein 
Protein accessionYP_001505365 
Protein GI158312857 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACTTCA CCGCCCCCCG GGTGCTCGTC GTCGACGACG ACGCCGTGAT CCGTCAGCTC 
GTGGTCGTCA ACCTCGAACT GGAAGGCTTC GAGGTGCACA CCGCGGTCGA CGGCGCGGAC
TGTCTCGAGC GCGTCCATGA GATCGCGCCG CATGTGATCA CCCTCGACAT CATGATGCCG
AGGGTGAACG GCTGGGACGT CGCGGCGCGG CTGCGCGGCG ATCCCGTGAC CGCCGACATC
AAGGTGATCA TGCTGACCGC GCGTGCCCAG GAGGCGGACG TCAAGCGTGG TGCCCGGCTG
GGTGTCGACT ACTACCTGAC CAAGCCGTTC GACCCGGACA TGCTCATCGG GGTGGTCAGC
AGGCTCGCCG CGGGCCAGCC GGTCTGA
 
Protein sequence
MYFTAPRVLV VDDDAVIRQL VVVNLELEGF EVHTAVDGAD CLERVHEIAP HVITLDIMMP 
RVNGWDVAAR LRGDPVTADI KVIMLTARAQ EADVKRGARL GVDYYLTKPF DPDMLIGVVS
RLAAGQPV