| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_01981 |
|---|
| Symbol | |
|---|
| ID | 4720334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 180445 |
|---|
| End bp | 181173 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640079861 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_001010514 |
|---|
| Protein GI | 123965433 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.125891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA CTAATCAAAT CAATAATGAC ACAATTCGAA AATCAAAAAT TTTATTGGTA
GATGATGAGC CAGGTTTAAG AACAGCTGTA AAAACATTTC TCGAAGACGA AGGATTTGAA
ATCTCTATTG CGGTAGACGG AGAGGATGGA TGGGAAAAAG CACAAACAAT TTTTCCAGAC
CTCATTATTA GCGATATTAT GATGCCTAGA TCAAATGGTT ACGCCCTATT AGAAAAAATA
AGAGAAGATG AAAAGCTAGG AGGCACGCCA GTGATTTTTC TGACAGCGAA GGGAATGACT
TTGGATAGAA CTCAGGGATA CCTCGCTGGC ATTGATGATT ATATTGCTAA ACCCTTTGAT
CCAGATGAAT TATCTGCAAG AGTTAAAAAT GTAATTAATA GGCAAGAGAG ATTACTCAAA
GAAGCAGCAA GATTTGCCGA TATTGATGTA AGCAAAATGG CAAAACAAAT CACTGAAATT
AAATCTATGC TTACAGATCA GAATCCACTA AATCAAGAAA ATTCAATAGA TATCCCCAAC
TTTACTCCAA GAGAAGCAAG TGTACTCCAG CTTGTGGCAG AGGGTCTCAT GAACAAAGAA
ATTGCCAGAA AACTTGAAAC CTCTATCAGA AATGTTGAGA AATACGTAAG CAGGCTGTTT
ATTAAAACAA GTACATCTAG CAGAACCGAA TTAGTCCGTT ATGCGCTTGA AAATCATTTA
GTAAAATAA
|
|---|
| Protein sequence | MNDTNQINND TIRKSKILLV DDEPGLRTAV KTFLEDEGFE ISIAVDGEDG WEKAQTIFPD
LIISDIMMPR SNGYALLEKI REDEKLGGTP VIFLTAKGMT LDRTQGYLAG IDDYIAKPFD
PDELSARVKN VINRQERLLK EAARFADIDV SKMAKQITEI KSMLTDQNPL NQENSIDIPN
FTPREASVLQ LVAEGLMNKE IARKLETSIR NVEKYVSRLF IKTSTSSRTE LVRYALENHL
VK
|
|---|
| |