More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2789 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2789  methyl-accepting chemotaxis sensory transducer  100 
 
 
529 aa  1072    Rhodoferax ferrireducens T118  Bacteria  normal  0.017789  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  70 
 
 
559 aa  395  1e-109  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  69.51 
 
 
572 aa  383  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  46.21 
 
 
578 aa  379  1e-104  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  53.76 
 
 
569 aa  370  1e-101  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  64.01 
 
 
527 aa  368  1e-100  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  66.13 
 
 
586 aa  361  1e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  61.23 
 
 
589 aa  358  9.999999999999999e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  59.88 
 
 
585 aa  358  1.9999999999999998e-97  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  68.61 
 
 
559 aa  358  1.9999999999999998e-97  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  59.63 
 
 
583 aa  356  5.999999999999999e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  60.64 
 
 
584 aa  353  4e-96  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.64 
 
 
584 aa  351  2e-95  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  64.04 
 
 
542 aa  350  3e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
537 aa  350  4e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  68.15 
 
 
577 aa  349  9e-95  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  64.98 
 
 
650 aa  347  3e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  67.96 
 
 
680 aa  346  5e-94  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  71.24 
 
 
516 aa  346  6e-94  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  62.46 
 
 
513 aa  344  2e-93  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  51.52 
 
 
555 aa  343  2.9999999999999997e-93  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  60.5 
 
 
578 aa  343  4e-93  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  61.56 
 
 
580 aa  342  7e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  65.9 
 
 
550 aa  342  8e-93  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  56.73 
 
 
587 aa  342  9e-93  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  59.54 
 
 
549 aa  342  1e-92  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  58.93 
 
 
557 aa  342  1e-92  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  58.93 
 
 
557 aa  342  1e-92  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  61.76 
 
 
598 aa  342  1e-92  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  58.93 
 
 
557 aa  342  1e-92  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  55.75 
 
 
596 aa  340  5e-92  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  61.59 
 
 
559 aa  339  7e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  60.52 
 
 
592 aa  337  2.9999999999999997e-91  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  53.09 
 
 
566 aa  337  3.9999999999999995e-91  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  60 
 
 
552 aa  336  5.999999999999999e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  59.75 
 
 
556 aa  336  7e-91  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  60.78 
 
 
513 aa  335  1e-90  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  61.24 
 
 
615 aa  335  1e-90  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  64.26 
 
 
433 aa  335  1e-90  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  61.24 
 
 
615 aa  335  1e-90  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  51.16 
 
 
553 aa  334  2e-90  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  55.2 
 
 
653 aa  334  2e-90  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  55.2 
 
 
653 aa  334  2e-90  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0335  methyl-accepting chemotaxis protein I  57.8 
 
 
394 aa  334  2e-90  Methylibium petroleiphilum PM1  Bacteria  normal  0.809135  normal  0.684623 
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  51.41 
 
 
553 aa  335  2e-90  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.14 
 
 
598 aa  335  2e-90  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  51.16 
 
 
553 aa  334  2e-90  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  51.16 
 
 
553 aa  334  2e-90  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2074  methyl-accepting chemotaxis protein II  51.56 
 
 
553 aa  334  3e-90  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.162752  hitchhiker  0.000345874 
 
 
-
 
NC_011205  SeD_A1326  methyl-accepting chemotaxis protein II  51.32 
 
 
553 aa  334  3e-90  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.452066  hitchhiker  2.3261e-17 
 
 
-
 
NC_011149  SeAg_B1203  methyl-accepting chemotaxis protein II  51.32 
 
 
553 aa  334  3e-90  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.697919  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  55.9 
 
 
543 aa  333  5e-90  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  58.75 
 
 
575 aa  333  5e-90  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_007947  Mfla_1934  methyl-accepting chemotaxis sensory transducer  63.52 
 
 
560 aa  333  5e-90  Methylobacillus flagellatus KT  Bacteria  normal  0.718562  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  54.88 
 
 
594 aa  332  1e-89  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_011083  SeHA_C2134  methyl-accepting chemotaxis protein II  51.08 
 
 
553 aa  332  1e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  1.16019e-17 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  57.23 
 
 
620 aa  332  1e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_011080  SNSL254_A2079  methyl-accepting chemotaxis protein II  51.08 
 
 
553 aa  331  2e-89  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.429347  hitchhiker  1.96177e-16 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  68.6 
 
 
566 aa  331  2e-89  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  57.52 
 
 
591 aa  331  2e-89  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  48.88 
 
 
471 aa  330  3e-89  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_010498  EcSMS35_1298  methyl-accepting chemotaxis protein II  52.21 
 
 
553 aa  331  3e-89  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00038087 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  57.52 
 
 
591 aa  330  3e-89  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  57.78 
 
 
618 aa  330  4e-89  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  57.81 
 
 
567 aa  330  5.0000000000000004e-89  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
595 aa  329  6e-89  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
562 aa  328  1.0000000000000001e-88  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  57.86 
 
 
579 aa  328  1.0000000000000001e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  60.98 
 
 
600 aa  327  3e-88  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  62.78 
 
 
581 aa  327  3e-88  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.72 
 
 
551 aa  327  3e-88  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  55.94 
 
 
617 aa  327  3e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  62.24 
 
 
755 aa  327  3e-88  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  62.78 
 
 
579 aa  327  4.0000000000000003e-88  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  55.28 
 
 
661 aa  327  5e-88  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3949  methyl-accepting chemotaxis protein I  57.19 
 
 
547 aa  327  5e-88  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.748503  normal 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  58.07 
 
 
585 aa  327  5e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
573 aa  326  6e-88  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
586 aa  326  7e-88  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  57.88 
 
 
535 aa  326  7e-88  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_04232  methyl-accepting chemotaxis protein I, serine sensor receptor  58.07 
 
 
551 aa  326  8.000000000000001e-88  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4586  methyl-accepting chemotaxis protein I  57.49 
 
 
557 aa  326  8.000000000000001e-88  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3642  methyl-accepting chemotaxis sensory transducer  58.07 
 
 
551 aa  326  8.000000000000001e-88  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04198  hypothetical protein  58.07 
 
 
551 aa  326  8.000000000000001e-88  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5868  methyl-accepting chemotaxis protein I  57.49 
 
 
554 aa  325  9e-88  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_4900  methyl-accepting chemotaxis protein I  57.49 
 
 
554 aa  325  9e-88  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.979291 
 
 
-
 
NC_007908  Rfer_3286  methyl-accepting chemotaxis sensory transducer  58.03 
 
 
499 aa  325  9e-88  Rhodoferax ferrireducens T118  Bacteria  normal  0.729026  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  62.09 
 
 
525 aa  325  9e-88  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_010468  EcolC_3700  methyl-accepting chemotaxis sensory transducer  57.49 
 
 
554 aa  325  1e-87  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.125609 
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  57.85 
 
 
561 aa  325  1e-87  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  56.29 
 
 
552 aa  325  1e-87  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_009801  EcE24377A_4947  methyl-accepting chemotaxis protein I  57.49 
 
 
554 aa  325  1e-87  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  57.19 
 
 
622 aa  325  1e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  58.15 
 
 
584 aa  324  2e-87  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
511 aa  325  2e-87  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  60.55 
 
 
752 aa  324  2e-87  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
519 aa  324  2e-87  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  55.84 
 
 
565 aa  325  2e-87  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  59.35 
 
 
586 aa  325  2e-87  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  62.01 
 
 
589 aa  324  2e-87  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
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