More than 300 homologs were found in PanDaTox collection
for query gene Vapar_3944 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012791  Vapar_3944  two component transcriptional regulator, LuxR family  100 
 
 		 204 aa  409  1e-113  Variovorax paradoxus S110  Bacteria  normal  0.508764  n/a   
 
 
-
 
NC_007908  Rfer_0921  two component LuxR family transcriptional regulator  56.65 
 
 		 199 aa  186  1e-46  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1743  two component LuxR family transcriptional regulator  46.84 
 
 		 209 aa  159  2e-38  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.518394 
 
 
-
 
NC_011662  Tmz1t_3400  two component transcriptional regulator, LuxR family  45.79 
 
 		 201 aa  158  5e-38  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2996  LuxR response regulator receiver  45.69 
 
 		 198 aa  154  1e-36  Dechloromonas aromatica RCB  Bacteria  normal  0.437807  normal  1 
 
 
-
 
NC_009997  Sbal195_3858  two component LuxR family transcriptional regulator  42.71 
 
 		 206 aa  152  4e-36  Shewanella baltica OS195  Bacteria  normal  1  normal  0.0335499 
 
 
-
 
NC_009901  Spea_3041  two component LuxR family transcriptional regulator  44.09 
 
 		 203 aa  151  7e-36  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3675  two component transcriptional regulator, LuxR family  43.55 
 
 		 206 aa  150  1e-35  Shewanella baltica OS223  Bacteria  normal  0.241682  normal  1 
 
 
-
 
NC_008700  Sama_3183  response regulator receiver protein  46.07 
 
 		 191 aa  150  1e-35  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_3732  response regulator receiver protein  43.55 
 
 		 206 aa  150  1e-35  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0593  response regulator receiver protein  43.55 
 
 		 206 aa  150  2e-35  Shewanella baltica OS155  Bacteria  normal  0.858162  n/a   
 
 
-
 
NC_008577  Shewana3_0637  two component LuxR family transcriptional regulator  41.49 
 
 		 203 aa  149  3e-35  Shewanella sp. ANA-3  Bacteria  normal  1  hitchhiker  0.0000059529 
 
 
-
 
NC_008321  Shewmr4_0637  two component LuxR family transcriptional regulator  42.02 
 
 		 203 aa  149  3e-35  Shewanella sp. MR-4  Bacteria  normal  1  hitchhiker  0.0000207768 
 
 
-
 
NC_009438  Sputcn32_0666  response regulator receiver protein  43.01 
 
 		 203 aa  148  4e-35  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_2567  response regulator receiver protein  44.62 
 
 		 202 aa  148  5e-35  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.94208 
 
 
-
 
NC_007493  RSP_0907  two component LuxR family transcriptional regulator  44.62 
 
 		 202 aa  148  5e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.285724  n/a   
 
 
-
 
NC_007948  Bpro_4101  two component LuxR family transcriptional regulator  43 
 
 		 229 aa  148  6e-35  Polaromonas sp. JS666  Bacteria  normal  0.878116  normal  1 
 
 
-
 
NC_010002  Daci_0846  two component LuxR family transcriptional regulator  44 
 
 		 209 aa  148  7e-35  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_1825  two component transcriptional regulator, LuxR family  42.13 
 
 		 205 aa  147  1.0000000000000001e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0736095 
 
 
-
 
NC_004347  SO_4157  DNA-binding response regulator  44.68 
 
 		 202 aa  146  2.0000000000000003e-34  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_0245  response regulator receiver protein  44.1 
 
 		 202 aa  146  2.0000000000000003e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_3982  two component LuxR family transcriptional regulator  41.49 
 
 		 216 aa  145  5e-34  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.0179399 
 
 
-
 
NC_008577  Shewana3_3697  two component LuxR family transcriptional regulator  44.27 
 
 		 201 aa  145  5e-34  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_2127  two component LuxR family transcriptional regulator  41.49 
 
 		 208 aa  145  6e-34  Acidovorax sp. JS42  Bacteria  normal  0.583598  normal  0.797665 
 
 
-
 
NC_011992  Dtpsy_1655  two component transcriptional regulator, LuxR family  41.49 
 
 		 208 aa  145  6e-34  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003036  tetrathionate reductase two-component response regulator  42.33 
 
 		 200 aa  144  1e-33  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3517  two component LuxR family transcriptional regulator  43.01 
 
 		 201 aa  144  1e-33  Shewanella sp. MR-4  Bacteria  normal  0.751217  normal  1 
 
 
-
 
NC_008322  Shewmr7_0436  two component LuxR family transcriptional regulator  43.23 
 
 		 202 aa  143  1e-33  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2130  two component LuxR family transcriptional regulator  40.96 
 
 		 207 aa  143  2e-33  Methylibium petroleiphilum PM1  Bacteria  normal  0.281977  normal  1 
 
 
-
 
NC_012791  Vapar_2791  two component transcriptional regulator, LuxR family  46.28 
 
 		 213 aa  142  2e-33  Variovorax paradoxus S110  Bacteria  normal  0.0590322  n/a   
 
 
-
 
NC_008254  Meso_2222  response regulator FixJ  43.08 
 
 		 205 aa  142  2e-33  Chelativorans sp. BNC1  Bacteria  normal  0.0446915  n/a   
 
 
-
 
NC_007794  Saro_1616  two component LuxR family transcriptional regulator  43.26 
 
 		 218 aa  142  3e-33  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_2460  two component LuxR family transcriptional regulator  38.97 
 
 		 208 aa  142  3e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.293905  normal  1 
 
 
-
 
NC_009665  Shew185_0451  response regulator receiver protein  44.15 
 
 		 200 aa  142  4e-33  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_3108  LuxR response regulator receiver  43.59 
 
 		 202 aa  142  4e-33  Dechloromonas aromatica RCB  Bacteria  normal  0.786061  normal  1 
 
 
-
 
NC_007347  Reut_A1301  LuxR response regulator receiver  40.84 
 
 		 210 aa  142  4e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.549132  n/a   
 
 
-
 
NC_011663  Sbal223_0478  two component transcriptional regulator, LuxR family  43.75 
 
 		 200 aa  142  4e-33  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1644  two component LuxR family transcriptional regulator  40.43 
 
 		 207 aa  142  4e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0578076 
 
 
-
 
NC_007908  Rfer_2210  two component LuxR family transcriptional regulator  38.83 
 
 		 208 aa  142  4e-33  Rhodoferax ferrireducens T118  Bacteria  normal  0.891166  n/a   
 
 
-
 
NC_009997  Sbal195_0467  two component LuxR family transcriptional regulator  44.15 
 
 		 200 aa  142  4e-33  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_2344  two component LuxR family transcriptional regulator  43.96 
 
 		 208 aa  142  4e-33  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2160  two component transcriptional regulator, LuxR family  39.89 
 
 		 210 aa  142  4e-33  Variovorax paradoxus S110  Bacteria  normal  0.563306  n/a   
 
 
-
 
NC_009052  Sbal_3862  response regulator receiver protein  43.62 
 
 		 200 aa  141  7e-33  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3894  response regulator receiver protein  43.22 
 
 		 208 aa  141  7e-33  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.52621  normal  0.385193 
 
 
-
 
NC_007948  Bpro_2674  two component LuxR family transcriptional regulator  38.83 
 
 		 208 aa  140  9e-33  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2095  response regulator receiver protein  41.53 
 
 		 216 aa  140  9.999999999999999e-33  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_5156  two component transcriptional regulator, LuxR family  46 
 
 		 208 aa  140  9.999999999999999e-33  Variovorax paradoxus S110  Bacteria  normal  0.497351  n/a   
 
 
-
 
NC_008836  BMA10229_A3087  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA1723  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0901353  n/a   
 
 
-
 
NC_007434  BURPS1710b_2748  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2232  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia mallei SAVP1  Bacteria  normal  0.97455  n/a   
 
 
-
 
NC_007973  Rmet_1194  two component LuxR family transcriptional regulator  39.68 
 
 		 210 aa  139  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00813352  normal  0.892025 
 
 
-
 
NC_009076  BURPS1106A_2670  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_2614  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia pseudomallei 668  Bacteria  normal  0.37823  n/a   
 
 
-
 
NC_009080  BMA10247_1505  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  1.9999999999999998e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0268  two component LuxR family transcriptional regulator  44.92 
 
 		 203 aa  140  1.9999999999999998e-32  Sphingomonas wittichii RW1  Bacteria  normal  0.0126561  normal  0.200699 
 
 
-
 
NC_011662  Tmz1t_3192  two component transcriptional regulator, LuxR family  43.01 
 
 		 212 aa  138  3.9999999999999997e-32  Thauera sp. MZ1T  Bacteria  normal  0.513085  n/a   
 
 
-
 
NC_008781  Pnap_1779  response regulator receiver protein  38.83 
 
 		 208 aa  139  3.9999999999999997e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.264941  hitchhiker  0.00228897 
 
 
-
 
NC_007651  BTH_I1862  LuxR family DNA-binding response regulator  40.59 
 
 		 212 aa  139  3.9999999999999997e-32  Burkholderia thailandensis E264  Bacteria  normal  0.340696  n/a   
 
 
-
 
NC_007948  Bpro_4652  two component LuxR family transcriptional regulator  43 
 
 		 208 aa  139  3.9999999999999997e-32  Polaromonas sp. JS666  Bacteria  normal  0.398364  normal  1 
 
 
-
 
NC_008062  Bcen_5938  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  139  3.9999999999999997e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.172889  n/a   
 
 
-
 
NC_008786  Veis_1921  response regulator receiver protein  40.32 
 
 		 208 aa  138  4.999999999999999e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.287441  normal  0.0849999 
 
 
-
 
NC_010551  BamMC406_2049  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  138  4.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.435361  normal  1 
 
 
-
 
NC_008752  Aave_4653  two component LuxR family transcriptional regulator  44.5 
 
 		 209 aa  138  4.999999999999999e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010084  Bmul_1131  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  138  4.999999999999999e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0589444  normal  0.612677 
 
 
-
 
NC_007510  Bcep18194_A5445  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  138  4.999999999999999e-32  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010508  Bcenmc03_2157  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  138  4.999999999999999e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_2176  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  138  4.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.116055  n/a   
 
 
-
 
NC_008391  Bamb_5346  two component LuxR family transcriptional regulator  44.79 
 
 		 210 aa  138  4.999999999999999e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.0593225  normal  0.752943 
 
 
-
 
NC_008542  Bcen2424_2139  two component LuxR family transcriptional regulator  40.59 
 
 		 212 aa  138  4.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B2505  two component LuxR family transcriptional regulator  44.1 
 
 		 210 aa  138  6e-32  Burkholderia sp. 383  Bacteria  normal  0.382458  normal  0.897172 
 
 
-
 
NC_008554  Sfum_0582  two component LuxR family transcriptional regulator  38.07 
 
 		 206 aa  138  6e-32  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.812865 
 
 
-
 
NC_008543  Bcen2424_3610  two component LuxR family transcriptional regulator  44.1 
 
 		 210 aa  138  7e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  0.603365  normal  1 
 
 
-
 
NC_010515  Bcenmc03_3910  two component LuxR family transcriptional regulator  44.1 
 
 		 210 aa  138  7e-32  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.855973 
 
 
-
 
NC_010552  BamMC406_3516  two component LuxR family transcriptional regulator  44.79 
 
 		 210 aa  137  8.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  0.584359  normal  0.0331166 
 
 
-
 
NC_010681  Bphyt_2593  two component transcriptional regulator, LuxR family  41.97 
 
 		 214 aa  137  8.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.382122  hitchhiker  0.00235574 
 
 
-
 
NC_008554  Sfum_0943  two component LuxR family transcriptional regulator  37.56 
 
 		 214 aa  137  1e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010622  Bphy_1472  two component LuxR family transcriptional regulator  43.81 
 
 		 214 aa  137  1e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.781461 
 
 
-
 
NC_008782  Ajs_4015  response regulator receiver protein  45.05 
 
 		 216 aa  137  1e-31  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc1597  response regulator transcription regulator protein  41.24 
 
 		 210 aa  136  2e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  0.395881  normal  1 
 
 
-
 
NC_009092  Shew_3240  two component LuxR family transcriptional regulator  40.86 
 
 		 207 aa  136  2e-31  Shewanella loihica PV-4  Bacteria  normal  1  normal  0.989265 
 
 
-
 
NC_011992  Dtpsy_3365  two component transcriptional regulator, LuxR family  44.55 
 
 		 216 aa  135  3.0000000000000003e-31  Acidovorax ebreus TPSY  Bacteria  normal  0.7758  n/a   
 
 
-
 
NC_007958  RPD_1342  response regulator FixJ  40.4 
 
 		 205 aa  135  3.0000000000000003e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.400465  normal  1 
 
 
-
 
NC_010505  Mrad2831_3275  response regulator FixJ  44.44 
 
 		 205 aa  135  3.0000000000000003e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_0609  two component LuxR family transcriptional regulator  43.3 
 
 		 199 aa  135  4e-31  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0534  response regulator receiver protein  42.02 
 
 		 200 aa  135  4e-31  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1539  two component LuxR family transcriptional regulator  41.45 
 
 		 214 aa  135  4e-31  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.274992 
 
 
-
 
NC_009485  BBta_2788  response regulator FixJ  40.31 
 
 		 205 aa  135  5e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0210669  normal  0.0766422 
 
 
-
 
NC_008825  Mpe_A0209  two component LuxR family transcriptional regulator  43.35 
 
 		 225 aa  135  5e-31  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  0.641351 
 
 
-
 
NC_010086  Bmul_5088  two component LuxR family transcriptional regulator  42.93 
 
 		 241 aa  135  6.0000000000000005e-31  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.685625 
 
 
-
 
NC_010338  Caul_2968  two component LuxR family transcriptional regulator  41.03 
 
 		 207 aa  134  6.0000000000000005e-31  Caulobacter sp. K31  Bacteria  normal  1  normal  0.138 
 
 
-
 
NC_010086  Bmul_3683  two component LuxR family transcriptional regulator  41.21 
 
 		 205 aa  135  6.0000000000000005e-31  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.00690698  normal  0.306381 
 
 
-
 
NC_010625  Bphy_5693  two component LuxR family transcriptional regulator  39.89 
 
 		 224 aa  134  9e-31  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.247452 
 
 
-
 
NC_012856  Rpic12D_1621  two component transcriptional regulator, LuxR family  40.21 
 
 		 211 aa  134  9.999999999999999e-31  Ralstonia pickettii 12D  Bacteria  normal  0.171805  normal  1 
 
 
-
 
NC_011992  Dtpsy_3511  two component transcriptional regulator, LuxR family  42.93 
 
 		 209 aa  134  9.999999999999999e-31  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2096  two component LuxR family transcriptional regulator  43.68 
 
 		 212 aa  134  9.999999999999999e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_1997  two component transcriptional regulator, LuxR family protein  37.44 
 
 		 197 aa  134  9.999999999999999e-31  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.333764  n/a   
 
 
-
 
NC_009831  Ssed_4067  two component LuxR family transcriptional regulator  40.31 
 
 		 209 aa  133  1.9999999999999998e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_1949  two component transcriptional regulator, LuxR family  40.21 
 
 		 211 aa  133  1.9999999999999998e-30  Ralstonia pickettii 12J  Bacteria  normal  0.24135  normal  0.0521212 
 
 
-
 
NC_008786  Veis_4829  response regulator receiver protein  42.03 
 
 		 209 aa  133  1.9999999999999998e-30  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.352064  normal  0.347274 
 
 
-
 
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