Gene Ajs_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4015 
Symbol 
ID4671924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4275207 
End bp4275857 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID639841055 
Productresponse regulator receiver protein 
Protein accessionYP_988195 
Protein GI121596299 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG CCTCCAACGC CACTGTGTAC ATCGTGGACG ACGACGCCGA GGTGCGCGAG 
GCGCTGGCTT GGCTGCTGCG CTCGCGCCGT GTGCTCAGCG AGGCGTTCGC CAGCGCCGAA
GCGTTCGAGA CCATGCTGGC CGAGCGCACC GCCAGCGGCC TCATGCAGCG CCAGCCCTGC
TGCCTGCTGC TGGACGTGCG CATGCCGGGC GGCATGAGCG GCCTGGCGCT GTTCGACAAG
ATGGTGGAGC GCGGCGACAC CGCGGGCATG CCGGTGATCT TCCTCACGGG CCACGCCGAC
GTGCCCACCG CCGTGGCCAC GGTCAAGCGC GGCGCGTTCG ACTTCTGCGA GAAGCCGTTT
TCCGACAATC AGCTCGTGGA CCGCATACAA GCAGCGCTGG AGCTGTCGGC CCGGCACATC
GAGGCCTGCC GCGCGCGCCA CGAACTGCAG GACCGGCTGG CCGACCTGAC CGACCGCGAG
CGCGATGTGA TGCGGCTGGT GGTCGAAGGC CTGCCCAACA AGCTCATCGC CGATCAGCTT
GACATCAGCG TGCGCACGGT GGAGGTGCAC CGCGCGCGCG TGTTCGACAA GATGCAGGTC
AAGTCGGCGG TGGAGCTTGC CAACCTGCTG CGCGCCGCGC CACCGGCGTA A
 
Protein sequence
MEPASNATVY IVDDDAEVRE ALAWLLRSRR VLSEAFASAE AFETMLAERT ASGLMQRQPC 
CLLLDVRMPG GMSGLALFDK MVERGDTAGM PVIFLTGHAD VPTAVATVKR GAFDFCEKPF
SDNQLVDRIQ AALELSARHI EACRARHELQ DRLADLTDRE RDVMRLVVEG LPNKLIADQL
DISVRTVEVH RARVFDKMQV KSAVELANLL RAAPPA