| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0637 |
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| Symbol | |
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| ID | 4251655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 739808 |
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| End bp | 740419 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638117200 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_732774 |
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| Protein GI | 113968981 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000207768 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCACG AATTGCCCGT GTATTTAATC GATGACGATG AGTCGGTGCG CCGCTCGCTG
CGGTTTATGC TCGAAAGCTA TGGCTTGAAT ATCCACGATT TTGATAGCGC CGAGGCGTTT
TTTGCCGCCA TCGACTTGAG CGAGCCGGGC TGTGCCTTAG TCGATGTGCG TATGCCGGGC
CTTAGCGGGC CGCAGTTACA TGCGCAATTA GTGCAGCATA ATAGTCCGCT GGCGGTGATT
TATCTTACCG GCCACGGCGA TGTGCCCATG GCGGTGGAGG CGCTAAAACT CGGGGCGGTG
GATTTTTTCC AAAAGCCCGC CGATGGCGCT AAGCTCGCGG ACGCGGTAGT GAAAGCGCTA
GAGCATGCCA AGGCATATCA CCAAAATAAT CAATATCTTC AGACTTATCA GGCGCTCACA
CCGCGTGAGC GGGAAATCCT CATTCTTATC GCCAAAGGCT ATAAGAATCA GGAGATCGCC
GATACGCTGT GCATCGCCAT GCGCACGGTC GAGATTCACC GCGCGAACTT AATGAAAGGC
ATGCAGGTCG GCTCGCTCGC CGAGATGATG TTAATTTATG GCCGCATCGC CGATCGCCTT
CCCTCCGCAT AA
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| Protein sequence | MSHELPVYLI DDDESVRRSL RFMLESYGLN IHDFDSAEAF FAAIDLSEPG CALVDVRMPG
LSGPQLHAQL VQHNSPLAVI YLTGHGDVPM AVEALKLGAV DFFQKPADGA KLADAVVKAL
EHAKAYHQNN QYLQTYQALT PREREILILI AKGYKNQEIA DTLCIAMRTV EIHRANLMKG
MQVGSLAEMM LIYGRIADRL PSA
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