| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0609 |
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| Symbol | |
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| ID | 4920694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 689031 |
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| End bp | 689630 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162142 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001092740 |
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| Protein GI | 127511543 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAG CCACGCCGCA ACCTATGCCC CTCTATCTGG TGGACGATGA CGAAGCCGTC
CTCGATTCCC TCAGCTTCAT GCTGCGCCAG TTCGGCTATG AGATGACCAC CTTCGTCTCT
GGCCTGCGCT TCCTGGAAGA GGTGGATCTG AGCCGGCCAG GCTGCGTCAT CCTCGACAGC
CGCATGCCGG CCATCAGCGG TCAGGCGCTA CAGCAAGAGC TGCTGACCAA GCAGAGCCCC
CTGGGGATCA TCTTCCTCAC CGGCCATGGC GACCTGCCCA TGGCGGTCAA TGCCTTTCGT
CAGGGCGCCT GCGACTTCTT TCAGAAGCCG GTATCGGGCC AGGCGTTAGC GGCCGCCATC
GACAAGAGCA TGCTCCACAG CCAGAAGGCC TTCGAGGCAC TGCAACTGAG TCACAACCTG
GCCACCCTGA GCGATCGCGA ACATCAGGTG CTTGAGCTGC TGATCCAGGG CAAGACCAAT
AAGCAGCTCT CCGAGGCGCT GTTCTTGTCG CTGCGTACCA TAGAGGTACA CAGATCCAAC
GTGATGAAGA AGCTCAAGGT GCACAACCTG GCCGAGTTAG CCAAGTACAG CCAGATCTGA
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| Protein sequence | MPQATPQPMP LYLVDDDEAV LDSLSFMLRQ FGYEMTTFVS GLRFLEEVDL SRPGCVILDS
RMPAISGQAL QQELLTKQSP LGIIFLTGHG DLPMAVNAFR QGACDFFQKP VSGQALAAAI
DKSMLHSQKA FEALQLSHNL ATLSDREHQV LELLIQGKTN KQLSEALFLS LRTIEVHRSN
VMKKLKVHNL AELAKYSQI
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