| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4101 |
|---|
| Symbol | |
|---|
| ID | 4013234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 4309556 |
|---|
| End bp | 4310245 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637943749 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_550892 |
|---|
| Protein GI | 91789940 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4566] Response regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.878116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC GCTCCGGCAA CGCACCCCGG GGCGCGGCGG GACCCCATGA GGAAAAAACC
GCGGGGGCCC TGCTGTCACC GCTGATCCAC CTGATCGACG ACGACGAGGC GGTGCGCAGC
AGCCTGGCGC TGCTGATCAG CACGGTCGGC CTGCGGGTGC AGAGCTGGAG CGACCCGCAG
GCCTTCATCA GCGGCTTTGA CCGCCAGGGC ATTGGCGCCA TCGTGCTGGA CGTGCGCATG
CCCGGCATCA GCGGTCTGAC CATACTGGAC ACGCTGATGG CCCAGGGCGT GGACCAGCCG
GTGATCATGC TGACCGGGCA CGGCACGGTG GACATGTGCC GCCGCGCCTT CAAGTCCGGC
GCGGCCGAAT TCCTGGAAAA GCCCGTCGAT GACGAGCAAC TGCTGGAGGC ATTGCAAAAC
GCGGTCCGCC AGCATGTGAA GTCGCGCGAG CGGCGCCAGA CCGACCAGCA GGCGCGGCAA
CGCTATGCGC AGCTGTCGGA GCGCGAACGC GAGGTGCTGG GCCTGATCGT CGCCGGCCTG
ACCAACAAGG AGATCGGCCG GGCGCTGGCT GTCTCGCCGC GCACCGTGGA AACCCACCGC
GCCAACCTGT TTGCCAAGCT GGAGGCCGAG TCATTGGCGC AGCTGATCCG GCAGTATGCG
ACGCTGGCAG ACGAAGCCGA CGGTCGATAG
|
|---|
| Protein sequence | MKERSGNAPR GAAGPHEEKT AGALLSPLIH LIDDDEAVRS SLALLISTVG LRVQSWSDPQ
AFISGFDRQG IGAIVLDVRM PGISGLTILD TLMAQGVDQP VIMLTGHGTV DMCRRAFKSG
AAEFLEKPVD DEQLLEALQN AVRQHVKSRE RRQTDQQARQ RYAQLSERER EVLGLIVAGL
TNKEIGRALA VSPRTVETHR ANLFAKLEAE SLAQLIRQYA TLADEADGR
|
|---|
| |