More than 300 homologs were found in PanDaTox collection
for query gene RPC_1156 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  57.38 
 
 
596 aa  647    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  78.75 
 
 
592 aa  965    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  55.97 
 
 
592 aa  641    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  55.43 
 
 
592 aa  647    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  55.26 
 
 
592 aa  644    Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  79.6 
 
 
593 aa  976    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  78.62 
 
 
592 aa  949    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  57.37 
 
 
586 aa  661    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  55.29 
 
 
592 aa  643    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  80.03 
 
 
593 aa  936    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  100 
 
 
615 aa  1253    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  57.61 
 
 
587 aa  644    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  81.28 
 
 
593 aa  977    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  81.14 
 
 
594 aa  985    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  55.63 
 
 
592 aa  643    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  58.63 
 
 
592 aa  664    Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  57.44 
 
 
587 aa  644    Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  55.63 
 
 
593 aa  639    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  58.79 
 
 
592 aa  655    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  57.61 
 
 
579 aa  634  1e-180  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  54.44 
 
 
591 aa  629  1e-179  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  57.61 
 
 
587 aa  628  1e-178  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_008254  Meso_0723  acyl-CoA dehydrogenase-like  54.28 
 
 
591 aa  610  1e-173  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.41 
 
 
593 aa  574  1.0000000000000001e-162  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  51.01 
 
 
598 aa  572  1.0000000000000001e-162  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.48 
 
 
594 aa  570  1e-161  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.74 
 
 
594 aa  570  1e-161  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  49.06 
 
 
598 aa  567  1e-160  Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.61 
 
 
597 aa  567  1e-160  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  49.4 
 
 
596 aa  567  1e-160  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  49.4 
 
 
596 aa  566  1e-160  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  49.4 
 
 
596 aa  567  1e-160  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  48.88 
 
 
596 aa  562  1.0000000000000001e-159  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  50.43 
 
 
597 aa  563  1.0000000000000001e-159  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  47.91 
 
 
596 aa  560  1e-158  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  48.07 
 
 
595 aa  560  1e-158  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  47.79 
 
 
596 aa  560  1e-158  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_008347  Mmar10_0835  acyl-CoA dehydrogenase domain-containing protein  52.05 
 
 
585 aa  558  1e-157  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00122363 
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  48.07 
 
 
596 aa  558  1e-157  Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  48.71 
 
 
594 aa  556  1e-157  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  50.17 
 
 
595 aa  553  1e-156  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
596 aa  553  1e-156  Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_010338  Caul_4489  acyl-CoA dehydrogenase domain-containing protein  52.29 
 
 
581 aa  553  1e-156  Caulobacter sp. K31  Bacteria  normal  normal  0.376796 
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  49.83 
 
 
596 aa  551  1e-155  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  49.05 
 
 
596 aa  547  1e-154  Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  49.05 
 
 
596 aa  547  1e-154  Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  49.23 
 
 
596 aa  544  1e-153  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.9 
 
 
600 aa  543  1e-153  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  47.86 
 
 
596 aa  542  1e-153  Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  50.17 
 
 
594 aa  543  1e-153  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  47.43 
 
 
596 aa  539  9.999999999999999e-153  Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  49.05 
 
 
596 aa  540  9.999999999999999e-153  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  49.05 
 
 
596 aa  540  9.999999999999999e-153  Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  49.48 
 
 
596 aa  541  9.999999999999999e-153  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  48.89 
 
 
596 aa  541  9.999999999999999e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  49.06 
 
 
594 aa  535  1e-151  Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  48.71 
 
 
596 aa  536  1e-151  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  49.83 
 
 
595 aa  536  1e-151  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  48.3 
 
 
594 aa  534  1e-150  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  47.6 
 
 
596 aa  533  1e-150  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  48.72 
 
 
594 aa  529  1e-149  Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  47.6 
 
 
596 aa  530  1e-149  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.91 
 
 
592 aa  529  1e-149  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  47.6 
 
 
596 aa  530  1e-149  Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  47.87 
 
 
600 aa  531  1e-149  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  48.71 
 
 
593 aa  529  1e-149  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  46.58 
 
 
596 aa  526  1e-148  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  47.09 
 
 
596 aa  525  1e-148  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  47.51 
 
 
594 aa  525  1e-148  Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  49.24 
 
 
595 aa  522  1e-147  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  55.18 
 
 
589 aa  523  1e-147  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  48.04 
 
 
593 aa  523  1e-147  Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  49.49 
 
 
593 aa  519  1e-146  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  45.72 
 
 
596 aa  519  1e-146  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  51.85 
 
 
593 aa  518  1.0000000000000001e-145  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  46.92 
 
 
596 aa  517  1.0000000000000001e-145  Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  47.36 
 
 
614 aa  509  1e-143  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  45.9 
 
 
572 aa  509  1e-143  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  45.24 
 
 
605 aa  502  1e-141  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_007802  Jann_3894  acyl-CoA dehydrogenase-like  46.99 
 
 
584 aa  504  1e-141  Jannaschia sp. CCS1  Bacteria  normal  normal  0.0512986 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  51.32 
 
 
593 aa  505  1e-141  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1469  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
571 aa  497  1e-139  Sphingomonas wittichii RW1  Bacteria  normal  0.16092  normal 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  47.28 
 
 
593 aa  498  1e-139  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  45.28 
 
 
589 aa  491  1e-137  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  43.75 
 
 
586 aa  489  1e-137  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1770  acyl-CoA dehydrogenase-like protein  46.67 
 
 
580 aa  488  1e-136  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.270198 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  46.06 
 
 
595 aa  483  1e-135  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  44.98 
 
 
592 aa  482  1e-135  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  44.64 
 
 
596 aa  481  1e-134  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  44.82 
 
 
592 aa  479  1e-134  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3059  acyl-CoA dehydrogenase-like  48.35 
 
 
570 aa  481  1e-134  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  44.48 
 
 
600 aa  479  1e-134  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  43.29 
 
 
594 aa  476  1e-133  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  43.91 
 
 
598 aa  475  1e-133  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  45.02 
 
 
596 aa  477  1e-133  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  45.05 
 
 
597 aa  478  1e-133  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_008687  Pden_3224  acyl-CoA dehydrogenase domain-containing protein  46.28 
 
 
584 aa  475  1e-133  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  44.83 
 
 
598 aa  476  1e-133  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_009512  Pput_2665  acyl-CoA dehydrogenase domain-containing protein  45.86 
 
 
592 aa  474  1e-132  Pseudomonas putida F1  Bacteria  normal  0.755851  normal 
 
 
-
 
NC_009952  Dshi_3085  putative acyl-CoA dehydrogenase family protein  47.35 
 
 
571 aa  474  1e-132  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.195202  normal 
 
 
-
 
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