| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1225 |
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| Symbol | |
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| ID | 4688701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1314881 |
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| End bp | 1316671 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834228 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_981461 |
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| Protein GI | 121604132 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.311938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.201393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACA AAGCACCCCT CAAGGACATG CTGTTTGATA TCAAGCACCT GGCGGGCATC
GACCAGATCG CGCAAATCCC CGGCTTTGAA GACGCCGGTT TCGACACCGC TCAGGCCGTG
CTCGAAGAAT GCGCCAAGTT CAGCGAAGGC GTGCTGTCGC CGCTGAACTG GGAAGGCGAC
AAGAACCCGT CGAGCTTTCA GTCCGGCGTG GTCACCACGA CGCCCGGTTT CAAGGAAGCC
TTCAAACAGT ACGTCGAAGG CGGCTGGCAG GGCCTGCAGC ATCCCGCTGA TTTCGGCGGC
CAGGGCCTGC CCAAGACGAT TGGCGCGGCC TGCGGCGAAA TGGCCAATTC GGCCAACATG
AGCTTTGCCT TGTGTCCGAT GCTGACCGAC GGCGCCATCG AAGCCCTGCT GACGGCCGGC
TCGGAGGCGC TCAATGCGGT CTATCTGGAA AAAATGATCA GCGGCCAGTG GACCGGCACC
ATGAACCTGA CCGAGCCGCA GGCCGGAAGC GACCTGGCCG CCGTGCGCAG CCGCGCCGAA
CCGCAGGCTG ACGGCAGCTA CAAGGTCTTC GGCACCAAGA TTTTCATCAC CTACGGCGAA
CACGACATGG CCGAGAACAT CGTCCATCTG GTGCTGGCCC GCGCGAGCGG CGCGCCCGAA
GGTGTCAAGG GCATCAGCCT GTTTGTCGTT CCCAAGTTCC TGGTCAATGC CGACGGCACG
CTGGGCGAGC GCAACGACGT GCACTGCGTC AGCATCGAGC ACAAGCTCGG CATCAAGGCT
TCGCCCACGG CCGTGCTGCA GTTCGGCGAC CACGGCGGCG CGGCCGGCTA CCTCGTCGGC
GAAGAAAATC GCGGCCTCGA ATACATGTTC ATCATGATGA ACTCGGCGCG CTACGCCGTC
GGCGTGCAGG GCATCGCGAT TGCCGAGCGC GCTTACCAAA AAGCCGTGGG CTTTGCCAAA
GACCGCGTAC AGAGCCGCCC GGTCGATGGC TCGATCAAGG CCAGCGCGCC CATCATTCAC
CACCCCGATG TCAGGCGCAT GCTGATGACC ATGCGCGCCT ATACCGAAGG CTGCCGCGCG
ATGGCCTCGG TGGCTGCCGC CGCCTACGAC GCTACGCATC ACCACCCTGA TGCCGAGGTG
CGCAAGCAGA GCCTGGCTTT TTATGAATTC ATGGTGCCGC TGGTCAAGGG CTACAGCACC
GAGATGAGCC AGGAAGTCAC CTCGCTGGGC GTGCAGGTGC ATGGCGGCAT GGGTTTCATC
GAGGAAACCG GCGCGGCGCA GTATTTCCGC GACGCCCGGA TTTTGACGAT TTACGAAGGC
ACGACCGCCA TCCAGGCCAA CGACCTGATC GGCCGCAAGA CCGCGCGCGA CGGCGGCCAG
ATTGCCAAAG GCATCGCCGC GCAGATCGAA GCGACCGAAA ACGAATTGCT GGCGCAGGGC
AGCGCCGACG CGCTGGCCGT GGCCAAGCGC CTGAAGGCCG CGCGCCAGGC CTTTGTCCAA
GTGGTCGAGT TTGTCGCCGC CAACACCCGG ACCAGCCCGA ATGCGGTGTT TGCCGGCAGC
GTGCCTTACC TGATGCTGGC GGGCAATGTG GTGGCGGGCT GGCAGCTGGC GCGTTCGCTG
CTGGTGGCCC AGGAGCAACT GGCGCAGGGC GTCGATGCGG CCTTCATGCA GGCCAAGATC
ACCACCGCCC GGTTTTACGC CGACCACCTG CTGACCAAAG CGCCCGGCAT GCGCGACAGC
ATCGTCGAAG GCGCAGGCAG CGTGAATGCG CTGGCACTGG ACGCGTTTTG A
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| Protein sequence | MSYKAPLKDM LFDIKHLAGI DQIAQIPGFE DAGFDTAQAV LEECAKFSEG VLSPLNWEGD
KNPSSFQSGV VTTTPGFKEA FKQYVEGGWQ GLQHPADFGG QGLPKTIGAA CGEMANSANM
SFALCPMLTD GAIEALLTAG SEALNAVYLE KMISGQWTGT MNLTEPQAGS DLAAVRSRAE
PQADGSYKVF GTKIFITYGE HDMAENIVHL VLARASGAPE GVKGISLFVV PKFLVNADGT
LGERNDVHCV SIEHKLGIKA SPTAVLQFGD HGGAAGYLVG EENRGLEYMF IMMNSARYAV
GVQGIAIAER AYQKAVGFAK DRVQSRPVDG SIKASAPIIH HPDVRRMLMT MRAYTEGCRA
MASVAAAAYD ATHHHPDAEV RKQSLAFYEF MVPLVKGYST EMSQEVTSLG VQVHGGMGFI
EETGAAQYFR DARILTIYEG TTAIQANDLI GRKTARDGGQ IAKGIAAQIE ATENELLAQG
SADALAVAKR LKAARQAFVQ VVEFVAANTR TSPNAVFAGS VPYLMLAGNV VAGWQLARSL
LVAQEQLAQG VDAAFMQAKI TTARFYADHL LTKAPGMRDS IVEGAGSVNA LALDAF
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