More than 300 homologs were found in PanDaTox collection
for query gene Lcho_3596 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  75.93 
 
 
593 aa  887    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  55.17 
 
 
596 aa  647    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  62.83 
 
 
592 aa  719    Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  58.53 
 
 
593 aa  688    Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.1 
 
 
597 aa  635    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.87 
 
 
594 aa  639    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  55.17 
 
 
596 aa  646    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
593 aa  1207    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  72.9 
 
 
594 aa  896    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  53.83 
 
 
596 aa  641    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  58.26 
 
 
598 aa  665    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  59.43 
 
 
598 aa  728    Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  55.17 
 
 
596 aa  647    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  55.35 
 
 
596 aa  631  1e-180  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  54.85 
 
 
596 aa  629  1e-179  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  53.01 
 
 
596 aa  629  1e-179  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  54.85 
 
 
596 aa  629  1e-179  Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  54.85 
 
 
596 aa  629  1e-179  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  53.18 
 
 
596 aa  628  1e-179  Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  55.02 
 
 
596 aa  628  1e-178  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.19 
 
 
594 aa  627  1e-178  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  54.01 
 
 
596 aa  626  1e-178  Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  53.1 
 
 
595 aa  625  1e-178  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  55.16 
 
 
600 aa  624  1e-177  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  54.01 
 
 
596 aa  624  1e-177  Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  54.68 
 
 
596 aa  624  1e-177  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  53.36 
 
 
596 aa  619  1e-176  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  52.35 
 
 
596 aa  615  1e-175  Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  52.18 
 
 
596 aa  609  1e-173  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  55.73 
 
 
595 aa  611  1e-173  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  52.85 
 
 
594 aa  611  1e-173  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  53.86 
 
 
594 aa  603  1.0000000000000001e-171  Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  53.13 
 
 
596 aa  602  1.0000000000000001e-171  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  53.86 
 
 
594 aa  602  1.0000000000000001e-171  Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  54.53 
 
 
594 aa  601  1e-170  Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  52.09 
 
 
596 aa  599  1e-170  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  52.01 
 
 
596 aa  601  1e-170  Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  53.86 
 
 
597 aa  600  1e-170  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  52.84 
 
 
596 aa  596  1e-169  Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  52.78 
 
 
594 aa  595  1e-169  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  52.52 
 
 
596 aa  595  1e-168  Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  52.81 
 
 
593 aa  593  1e-168  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  52.51 
 
 
596 aa  594  1e-168  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  52.52 
 
 
596 aa  595  1e-168  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  55.03 
 
 
614 aa  594  1e-168  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  51.85 
 
 
596 aa  593  1e-168  Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  52.68 
 
 
593 aa  590  1e-167  Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  51.78 
 
 
596 aa  587  1e-166  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  52.68 
 
 
595 aa  582  1.0000000000000001e-165  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  49.25 
 
 
586 aa  582  1.0000000000000001e-165  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  51.43 
 
 
586 aa  583  1.0000000000000001e-165  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  51.56 
 
 
600 aa  580  1e-164  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  50.41 
 
 
605 aa  580  1e-164  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  50.84 
 
 
593 aa  577  1.0000000000000001e-163  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  53.36 
 
 
595 aa  577  1.0000000000000001e-163  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  52.98 
 
 
592 aa  560  1e-158  Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  53.75 
 
 
593 aa  555  1e-157  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  52.39 
 
 
592 aa  552  1e-156  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  52.37 
 
 
596 aa  550  1e-155  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  48.26 
 
 
600 aa  543  1e-153  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  49.24 
 
 
592 aa  541  9.999999999999999e-153  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  49.91 
 
 
594 aa  540  9.999999999999999e-153  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  48.91 
 
 
592 aa  536  1e-151  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  52.68 
 
 
592 aa  536  1e-151  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  53.77 
 
 
589 aa  537  1e-151  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  49.74 
 
 
615 aa  536  1e-151  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  47.09 
 
 
594 aa  533  1e-150  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  47.48 
 
 
589 aa  533  1e-150  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  51.87 
 
 
579 aa  533  1e-150  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  50.68 
 
 
587 aa  530  1e-149  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  51.69 
 
 
587 aa  529  1e-149  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  50.76 
 
 
587 aa  529  1e-149  Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  48.18 
 
 
592 aa  530  1e-149  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  49.08 
 
 
592 aa  529  1e-149  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  48.91 
 
 
592 aa  526  1e-148  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  49.07 
 
 
592 aa  522  1e-147  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  48.66 
 
 
592 aa  524  1e-147  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  45.85 
 
 
594 aa  521  1e-146  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  46.92 
 
 
626 aa  519  1e-146  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  47.56 
 
 
591 aa  516  1.0000000000000001e-145  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1469  acyl-CoA dehydrogenase domain-containing protein  48.66 
 
 
571 aa  516  1.0000000000000001e-145  Sphingomonas wittichii RW1  Bacteria  normal  0.16092  normal 
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  50.94 
 
 
593 aa  517  1.0000000000000001e-145  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  50.75 
 
 
593 aa  517  1.0000000000000001e-145  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  46.28 
 
 
597 aa  514  1e-144  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  45.09 
 
 
596 aa  509  1e-143  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  50.38 
 
 
593 aa  508  1e-143  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  48.64 
 
 
572 aa  511  1e-143  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  48.75 
 
 
593 aa  509  1e-143  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0723  acyl-CoA dehydrogenase-like  48.33 
 
 
591 aa  509  1e-143  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  45.83 
 
 
591 aa  506  9.999999999999999e-143  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  46.68 
 
 
597 aa  506  9.999999999999999e-143  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  46.27 
 
 
592 aa  503  1e-141  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  46.27 
 
 
592 aa  504  1e-141  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  45.09 
 
 
592 aa  504  1e-141  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  45.61 
 
 
598 aa  504  1e-141  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  46.43 
 
 
592 aa  503  1e-141  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  46.35 
 
 
595 aa  499  1e-140  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  46.1 
 
 
592 aa  501  1e-140  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  45.23 
 
 
595 aa  501  1e-140  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  44.02 
 
 
597 aa  501  1e-140  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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