Gene Rleg_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0600 
Symbol 
ID8015459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp630462 
End bp632240 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content65% 
IMG OID644823190 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002974443 
Protein GI241203347 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.198315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.545075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGG CGCCCGTCGA GGAAATCGCG TTCACGTTGA AGCATGTCGC GGGCATGGGC 
GAGGCGATGT CAAAAGGGAT GCTCGGTGAT CTCGGCGAAG ATCTGGTCGA TGCCATCCTG
GCCGAGGCCG GGCGTTTTGC CACAGAGGAA GTGGCGCCGC TTGCCGACAT CGGCGACCGC
CAGGGCGCCC GCCTGATCGA TGGCGAGGTC AGGCTGCCGG ATGGCTGGCG CGATCTCTAT
CGCCATTGGA TTGCCGGCGG CTGGAACGGC CTGACGGCGC CCGAAGCTTT CGGCGGCCAG
GCCTTGCCGC ATATGCTGAA TGTCGCAGCA CTCGAAATGT GGAATTCCGG TTCCATGGCC
TTTGCGCTCG CTCCGACGCT GACGATGGGC GCCATCGAGG CGGTCAGCAC CCATGGCAGT
GCTGCGCTGA AAGACACATA TCTGGAAAAG ATGGTCTCCG GCGAATGGAC CGGCACCATG
AACCTGACGG AGCCGCATGC CGGCTCCGAT CTCGGCGTGC TGAAAGCCCG CGCCGAGCGC
CGCGATGACG GCAGCTACCG CCTGTTCGGC CAGAAGATCT TCATCACCTG GGGTGAGCAT
GACGCGGCCG ACAACATCAT CCATCTGGTG CTCGCCCGCC TGCCGGATGC GCCGGCCGGC
ACACGCGGCA TCTCGCTCTT CCTGGTGCCG AAATTCCTGG TGAACGACGA CGGCTCGCTT
GGGCCCCGCA ATGATCTGTT CTGCCATTCG CTGGAGCACA AGCTCGGCAT CCATGGCTCG
CCGACCTGCA CGATGATCTA CGGCGACGGA AAATTCGGCA GTGAAAAGGG CGCTGTGGGA
TGGCTGGTCG GCGAGGAGAA CAAGGGGCTG GCCTGCATGT TCACGATGAT GAACAATGCC
CGCCTTGCCG TCGGCATGCA GGGCGTGGCG ATCGCGGAGG CCGCCACCCA GAAGGCGCTC
GCCTATGCCA GGGAACGCAC CCAGGGCAGG GCACCGGGTT CAGGCAGTGC CGGCATGAGC
CCGATCGTCG AACATCCCGA TGTCGCCCGC ATGCTCCTCA CCATGAAGGC GCTGACGCAA
GGGGCGCGCG CCATCTCCTA TGTCTGCGCC CATGCGATCG ACATGTCGCA CCGGGCAGGT
GACTCCAGCC GCCACTGGCA GGAGCGCGCC GCCCTTTTGA CGCCGATTGC CAAATCCTTT
TCGACGGATG CCGGCGTCGA CGTCGCCTCG CTCGGCATCC AGGTGCATGG CGGCATGGGT
TTCATCGAGG AGACGGGTGC GGCGCGTTAT CTCCGCGATG CCCGCATCGC CCCGATCTAC
GAGGGTACCA ACGGCATCCA GGCGATCGAC CTCGTCACCC GCAAGCTGCC GCTCTCCGGC
GGCGATCAGG TGAAGGGCTT CATCGCCGAG CTTAGAGAGA TCGCCGACGA CGTCCGCCGC
TCCAATCTCG ATGGTTTCGG CGAGACCGCT GTCAGGCTCG ACGCGGCGAT CGTCGATCTC
GAACAGGCGA CCGCCTGGCT GATGAAGACG CTTGCCGAGA ACAGCACCGC CGAGGCGCTC
TCGGGTGCCA CCCCCTATCA GCGCCTGTTC GGGCTGGTGC TCACCGGCTG TTATCTTGCC
AAGGGTGGTC TCGCCGAGGC AGCCGATGGG GCAGGTGAAA ACCGCATCGC GCTCTGCCGC
TTCGCCGCCG AAAACCTGCT TGCCGAGACC GCAGCCCTGC GCGACCGCGT CGTCAATGGC
GCGGCAAGCC TTGCCGCCGC CCGTATCCTG CTTGCCTGA
 
Protein sequence
MYKAPVEEIA FTLKHVAGMG EAMSKGMLGD LGEDLVDAIL AEAGRFATEE VAPLADIGDR 
QGARLIDGEV RLPDGWRDLY RHWIAGGWNG LTAPEAFGGQ ALPHMLNVAA LEMWNSGSMA
FALAPTLTMG AIEAVSTHGS AALKDTYLEK MVSGEWTGTM NLTEPHAGSD LGVLKARAER
RDDGSYRLFG QKIFITWGEH DAADNIIHLV LARLPDAPAG TRGISLFLVP KFLVNDDGSL
GPRNDLFCHS LEHKLGIHGS PTCTMIYGDG KFGSEKGAVG WLVGEENKGL ACMFTMMNNA
RLAVGMQGVA IAEAATQKAL AYARERTQGR APGSGSAGMS PIVEHPDVAR MLLTMKALTQ
GARAISYVCA HAIDMSHRAG DSSRHWQERA ALLTPIAKSF STDAGVDVAS LGIQVHGGMG
FIEETGAARY LRDARIAPIY EGTNGIQAID LVTRKLPLSG GDQVKGFIAE LREIADDVRR
SNLDGFGETA VRLDAAIVDL EQATAWLMKT LAENSTAEAL SGATPYQRLF GLVLTGCYLA
KGGLAEAADG AGENRIALCR FAAENLLAET AALRDRVVNG AASLAAARIL LA