| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0739 |
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| Symbol | |
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| ID | 4037530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 816675 |
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| End bp | 818459 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637976115 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_582894 |
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| Protein GI | 94309684 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00752028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATC GTGCACCGCT CAAGGACATG CAGTTCGTCA TGAACGAGCT GGCGGGCCTG
GAAAGCATCA GCCAGTTGCC TGGCTACGAA GACGCCACGC CCGATACGGC ACAGGCCGTG
CTGGAAGAGG CCGCGAAGTT CAACGAACAG GTCGTGGCAC CGCTGAACCG CGCGGGCGAT
CTGAACCCGA GCAGCTGGAA GGACGGCGTG GTGACCACGA CGCCGGGTTT CAGCGACGCA
TTTCGCCAGT TTGGTGAAGG CGGCTGGCAG GGCGTGCTGC ATCCGTCCGA TTTCGGCGGC
CAGGGTCTGC CGAAGCTGGT GGCCACGCCG TGCAACGAGA TGCTGAATGC GGCGAACCTG
TCGTTCGCGC TCTGCCCGTT GCTGACCGAC GGCGCGATCG AGGCGCTGCT GACCGCCGGA
TCGGATGCCC AGAAGGAAAC CTTCCTGCCG AAGCTGATCT CGGGAGAGTG GACCGGCACG
ATGAACCTGA CTGAGCCGCA GGCCGGTTCG GATCTGGCCG CCGTGCGGAC CCGCGCGGAG
CCGCAGGGCG ATGGCACGTT CAAGGTCTTC GGCACCAAGA TCTTCATCAC GTATGGCGAG
CACGACATGG CGGAGAACAT CGTCCATCTC GTGCTGGCAC GCACCCCGAA CGCGCCCGAA
GGCGTCAAGG GCATTTCGCT GTTCATCGTG CCGAAGTTCC TGCTCAATGC GGACGGTTCG
CTGGGCGAGC GCAACGATGT GCATTGCGTG TCGATCGAAC ACAAGCTCGG TATCAAGGCC
AGCCCCACCG CCGTGCTGCA GTTCGGCGAT CACGGTGGCG CCATTGGCAC GCTGGTTGGC
GAGGAGAACC GCGGGCTTGA GTACATGTTC ATCATGATGA ACTCGGCACG CTTCTCGGTG
GGCATGCAAG GCATCGCCGT GTCCGAGCGT GCTTACCAGC AGGCCGTGGC GTTCGCGAAG
GAGCGCGTGC AAAGCCGTCC GGTCGATGGC TCGGCCCGCG AGGCCGTGAC GATCATCCAT
CATCCGGACG TCAAGCGGAT GCTGATGACG ATGCGCGCGC TGATCGAAGG CGCACGCTCG
GTGGCCTATG TGGCCGCCGC CGCGAGCGAC ATCGCGCACC AGCATCCGGA TGAGGGCGTG
CGTCGTCAGA ACATGGCGCT GTACGAGTTC CTGGTGCCGG TGGTGAAGGG GTGGAGCACC
GAGCTGTCGA TCGACGTGAC CAGCCTGGGC GTGCAAGTTC ACGGTGGCAT GGGATTCATC
GAGGAAACCG GCGCGGCACA ACATTATCGC GACGCGCGCA TCCTGCCGAT CTATGAAGGC
ACGACCGCGA TCCAGGCGAA CGATCTGATT GGCCGCAAGA CCGTGCGCGA TGGCGGTGCC
ATGGCACGCG CGATCTGTGC ACAGATCGCC GAGACCGAAG CGGCGCTGGG CAAACACGGC
GGTGACGCGT TCACGGCGGT GCAGGCGCAA CTGAAGCAGG GCCGTGAAGC GCTGGAGGCC
GTGGTGGAGT TCGTCATCGG CAGCGCGAAG GCGGACCCGA ATGCCGTGTT CGCCGGTAGC
GTGCCGTACC TGAAGCTGTG CGGCATCGTG TTCTCGGGCT GGCAGTTCGG CCGTGCCATG
CTGGTTGCCG ATGCGAAGCG CGCGGAAGAT CCAGCCTTCT ACGACGCAAA GATCGCGACG
GCGCATTTCT TCGGCCAGCA CATCCTGTCC CAGGCATCCG CATTCCGTGC CGCGATTGTG
GGTGGTGGCG CTCCGGCCAA CGCGCTGACG GCGGATCAGT TCTGA
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| Protein sequence | MTYRAPLKDM QFVMNELAGL ESISQLPGYE DATPDTAQAV LEEAAKFNEQ VVAPLNRAGD
LNPSSWKDGV VTTTPGFSDA FRQFGEGGWQ GVLHPSDFGG QGLPKLVATP CNEMLNAANL
SFALCPLLTD GAIEALLTAG SDAQKETFLP KLISGEWTGT MNLTEPQAGS DLAAVRTRAE
PQGDGTFKVF GTKIFITYGE HDMAENIVHL VLARTPNAPE GVKGISLFIV PKFLLNADGS
LGERNDVHCV SIEHKLGIKA SPTAVLQFGD HGGAIGTLVG EENRGLEYMF IMMNSARFSV
GMQGIAVSER AYQQAVAFAK ERVQSRPVDG SAREAVTIIH HPDVKRMLMT MRALIEGARS
VAYVAAAASD IAHQHPDEGV RRQNMALYEF LVPVVKGWST ELSIDVTSLG VQVHGGMGFI
EETGAAQHYR DARILPIYEG TTAIQANDLI GRKTVRDGGA MARAICAQIA ETEAALGKHG
GDAFTAVQAQ LKQGREALEA VVEFVIGSAK ADPNAVFAGS VPYLKLCGIV FSGWQFGRAM
LVADAKRAED PAFYDAKIAT AHFFGQHILS QASAFRAAIV GGGAPANALT ADQF
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