| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0487 |
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| Symbol | |
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| ID | 5321321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 528649 |
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| End bp | 530430 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640789422 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001326179 |
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| Protein GI | 150395712 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGG CACCGGTCGA CGAGATCGCA TTCACCCTGA AGCATGTGGC CGGCTTGGCC
GAGGCAATCG ATCGCGGCGC ATTCGGCGAG CTGGGCGAGG ACCTGGTGGA TGCGATCCTT
GGCGAGGCCG GGCGCTTCGC CTCGGAAGAG GTGGCGCCGC TTGGCGACGC AGGTGACCGG
CGAGGGGCGC GGCTCGTCGG CGGCACAGTC GAGACGCCGG AGGGCTGGCG GGACCTCTAC
CACAACTGGA TTGCCGGCGG CTGGAACGGC CTGACGGCGC CGGAAGCCTA TGGCGGGCAG
AACCTGCCGC ATATGCTGCA CGTTGCCGCC ATGGAAATGT GGAACAGCGG CTCGATGGCT
TTCGCGCTTG CGCCAACACT GACAATGGGT GCCATCGAAG CGCTCGAGAA GCACGGCACC
GAGGTTCTAA AGTCGGTCTT CCTGCCGAAA ATGGTTTCGG GGGAGTGGAT GGGCACGATG
AACCTGACAG AGCCACATGC CGGCTCCGAT CTCGGGGTGC TCAAGACCCG CGCCGAGCGC
TGCGACGACG GCACCTACCG CATTTTCGGG CAGAAGATCT TCATTACCTG GGGCGAGCAC
GACTTCACCG ACAATATCGT CCATCTGGTG CTTGCGCGGC TGCCGGATGC GCCGCCGGGA
ACCAAGGGCA TTTCACTGTT TCTCGTGCCG AAATTCCTCG TCAATGGCGA CGGCTCGCTC
GGCGCCCGCA ACGATCTCTT CTGCCATTCG CTTGAGCACA AGCTCGGCAT CCACGGATCG
CCGACCTGCA CCATGATCTA CGGCGACGGC CGGTTTGGCG CCGAAAAAGG TGCTGTCGGT
TACCTCGTGG GGGAAGAAAA CCGGGGCCTC GCCTGTATGT TCACGATGAT GAACAATGCA
CGGCTTGCAG TCGGCATGCA GGGCGTGGCG ATCGCGGAGG CTGCGACCCA GAAGGCCATC
GCCTACGCCA AGGAGCGCAG GCAGGGCCGT GCGCCGGGAT GGAGCGGCGA GGGCATGAGC
CCGATCATCG AACATCCGGA CGTCGCCCGC ATGCTGCTGA CGATGAAGGC GCTGACTCAA
GGTTCGCGCG CCATCGCCTA TGCCTGCGCC CACGCTGTCG ACATGGCCCA TTTTGCGGAA
GGCGAGGAAG CGCGCCACTG GCAGGAGCGT TCGAGTTTGC TGACGCCGAT CGCCAAGTCC
TTTGCCACCG ATGCCGGCGT TGACGTCGCC TCCTTGGGGG TTCAGGTTCA TGGCGGTATG
GGCTTCATCG AGGAGACCGG GGCCGCGCGC TATCTCCGCG ACGCCCGCAT CGCGCCAATC
TATGAAGGGA CCAACGGGAT CCAGGCAATC GACCTGGTCA CCCGCAAGCT GCCGCTTTCC
GATGGCGCGC ATGTGCGCGG CTTCATTGCC GAACTCCGGG AGGTTACAGC TGCCGTTGCC
GCGTCGAACA GAAAAGGGTT CGGCGAAACG GCGGCGCGCC TGGATGCGGC GATTGCGGAT
CTCGAAGGGG CGACCGCGTG GCTGCTTTCG GCAATTCGAG ACGGAAAGCT TGCCGAGGCG
CTCGCCGGTG CGACCGCTTA TCAGCGCCTG TTCGGTCTCG TGCTGACCGC GATCTATCTC
GCCAAGGGCG GGCTTGCCGA AGCCGGTGAC GGAAAGCAGG AACAGCGCAT TGCGCTTTGC
CGCTTCGCGG CGGAAAACCT GGTTTCGGAG ACGAGTGCAC TCGAGGACCG CGTAACCAAC
GGCGCGGAAA GTCTCGCCGC TGCCCGTTCC ATACTCGATT GA
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| Protein sequence | MYKAPVDEIA FTLKHVAGLA EAIDRGAFGE LGEDLVDAIL GEAGRFASEE VAPLGDAGDR
RGARLVGGTV ETPEGWRDLY HNWIAGGWNG LTAPEAYGGQ NLPHMLHVAA MEMWNSGSMA
FALAPTLTMG AIEALEKHGT EVLKSVFLPK MVSGEWMGTM NLTEPHAGSD LGVLKTRAER
CDDGTYRIFG QKIFITWGEH DFTDNIVHLV LARLPDAPPG TKGISLFLVP KFLVNGDGSL
GARNDLFCHS LEHKLGIHGS PTCTMIYGDG RFGAEKGAVG YLVGEENRGL ACMFTMMNNA
RLAVGMQGVA IAEAATQKAI AYAKERRQGR APGWSGEGMS PIIEHPDVAR MLLTMKALTQ
GSRAIAYACA HAVDMAHFAE GEEARHWQER SSLLTPIAKS FATDAGVDVA SLGVQVHGGM
GFIEETGAAR YLRDARIAPI YEGTNGIQAI DLVTRKLPLS DGAHVRGFIA ELREVTAAVA
ASNRKGFGET AARLDAAIAD LEGATAWLLS AIRDGKLAEA LAGATAYQRL FGLVLTAIYL
AKGGLAEAGD GKQEQRIALC RFAAENLVSE TSALEDRVTN GAESLAAARS ILD
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