More than 300 homologs were found in PanDaTox collection
for query gene Smed_0487 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  55.97 
 
 
593 aa  639    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  67.06 
 
 
592 aa  794    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  61.12 
 
 
592 aa  667    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
593 aa  1202    Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  56.21 
 
 
592 aa  648    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  59.9 
 
 
592 aa  672    Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  56.76 
 
 
596 aa  637    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  66.72 
 
 
592 aa  790    Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  74.87 
 
 
591 aa  923    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  80.74 
 
 
592 aa  983    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  57.72 
 
 
586 aa  657    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  81.08 
 
 
592 aa  985    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_008254  Meso_0723  acyl-CoA dehydrogenase-like  66.5 
 
 
591 aa  786    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  67.07 
 
 
592 aa  778    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  55.63 
 
 
615 aa  634  1e-180  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  53.7 
 
 
592 aa  630  1e-179  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  55.37 
 
 
594 aa  630  1e-179  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  54.44 
 
 
593 aa  624  1e-177  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  56.37 
 
 
587 aa  617  1e-175  Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  57.22 
 
 
587 aa  615  1e-175  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  56.03 
 
 
587 aa  617  1e-175  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  55.54 
 
 
593 aa  610  1e-173  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  56.22 
 
 
579 aa  600  1e-170  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  49.32 
 
 
598 aa  541  9.999999999999999e-153  Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.06 
 
 
597 aa  535  1e-151  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.31 
 
 
593 aa  530  1e-149  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.65 
 
 
594 aa  526  1e-148  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
598 aa  525  1e-148  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
596 aa  524  1e-147  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
596 aa  524  1e-147  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  48.03 
 
 
596 aa  523  1e-147  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
596 aa  525  1e-147  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_4489  acyl-CoA dehydrogenase domain-containing protein  50.77 
 
 
581 aa  519  1e-146  Caulobacter sp. K31  Bacteria  normal  normal  0.376796 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.53 
 
 
594 aa  518  1.0000000000000001e-145  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  52.06 
 
 
589 aa  506  9.999999999999999e-143  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  51.59 
 
 
595 aa  506  9.999999999999999e-143  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  48.83 
 
 
594 aa  506  9.999999999999999e-143  Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  48.15 
 
 
596 aa  503  1e-141  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  46.8 
 
 
596 aa  503  1e-141  Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  46.13 
 
 
596 aa  503  1e-141  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  46.22 
 
 
595 aa  503  1e-141  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  56.46 
 
 
593 aa  502  1e-141  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  48.57 
 
 
594 aa  503  1e-141  Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  47.74 
 
 
596 aa  500  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  48.82 
 
 
594 aa  499  1e-140  Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008347  Mmar10_0835  acyl-CoA dehydrogenase domain-containing protein  47.89 
 
 
585 aa  499  1e-140  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00122363 
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  48.12 
 
 
596 aa  499  1e-140  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  47.46 
 
 
600 aa  499  1e-140  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  47.9 
 
 
596 aa  501  1e-140  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  48.56 
 
 
595 aa  499  1e-140  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  47.39 
 
 
596 aa  500  1e-140  Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  47.39 
 
 
596 aa  498  1e-140  Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  48.4 
 
 
597 aa  501  1e-140  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  48.07 
 
 
596 aa  502  1e-140  Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  48.07 
 
 
596 aa  502  1e-140  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
596 aa  501  1e-140  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  47.47 
 
 
596 aa  496  1e-139  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  46.8 
 
 
596 aa  497  1e-139  Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  47.25 
 
 
594 aa  496  1e-139  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  45.62 
 
 
596 aa  493  9.999999999999999e-139  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  46.8 
 
 
596 aa  493  9.999999999999999e-139  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  45.92 
 
 
594 aa  492  9.999999999999999e-139  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
600 aa  489  1e-137  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  46.13 
 
 
596 aa  490  1e-137  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  46.31 
 
 
593 aa  488  1e-136  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  46.8 
 
 
596 aa  486  1e-136  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  54.33 
 
 
593 aa  484  1e-135  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_009511  Swit_1469  acyl-CoA dehydrogenase domain-containing protein  54.11 
 
 
571 aa  484  1e-135  Sphingomonas wittichii RW1  Bacteria  normal  0.16092  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  45.65 
 
 
594 aa  485  1e-135  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  45.9 
 
 
596 aa  485  1e-135  Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  45.33 
 
 
598 aa  483  1e-135  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  47.26 
 
 
591 aa  481  1e-134  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  47.57 
 
 
593 aa  481  1e-134  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  46.41 
 
 
594 aa  479  1e-134  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  45.83 
 
 
597 aa  481  1e-134  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  48.32 
 
 
595 aa  480  1e-134  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  47.24 
 
 
589 aa  478  1e-134  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  48.66 
 
 
614 aa  480  1e-134  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  44.67 
 
 
598 aa  478  1e-133  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  44.79 
 
 
597 aa  478  1e-133  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3059  acyl-CoA dehydrogenase-like  47.55 
 
 
570 aa  476  1e-133  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  45.09 
 
 
598 aa  478  1e-133  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  45.94 
 
 
595 aa  477  1e-133  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  53.05 
 
 
572 aa  475  1e-132  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  45.74 
 
 
597 aa  470  1.0000000000000001e-131  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_008686  Pden_0434  acyl-CoA dehydrogenase domain-containing protein  49.57 
 
 
563 aa  469  1.0000000000000001e-131  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.96 
 
 
592 aa  469  1.0000000000000001e-131  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  45.02 
 
 
592 aa  470  1.0000000000000001e-131  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  44.17 
 
 
600 aa  469  1.0000000000000001e-131  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_009428  Rsph17025_2462  acyl-CoA dehydrogenase domain-containing protein  48.81 
 
 
562 aa  471  1.0000000000000001e-131  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.372229 
 
 
-
 
NC_009952  Dshi_3085  putative acyl-CoA dehydrogenase family protein  48.16 
 
 
571 aa  471  1.0000000000000001e-131  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.195202  normal 
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  45.73 
 
 
596 aa  471  1.0000000000000001e-131  Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  45.73 
 
 
596 aa  471  1.0000000000000001e-131  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  43.93 
 
 
597 aa  467  9.999999999999999e-131  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  45.47 
 
 
605 aa  467  9.999999999999999e-131  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  43.93 
 
 
597 aa  467  9.999999999999999e-131  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  45.35 
 
 
592 aa  466  9.999999999999999e-131  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_3132  acyl-CoA dehydrogenase family protein  45.45 
 
 
589 aa  466  9.999999999999999e-131  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  45.12 
 
 
596 aa  466  9.999999999999999e-131  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  44.87 
 
 
626 aa  467  9.999999999999999e-131  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>