| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0514 |
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| Symbol | |
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| ID | 5052799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 506733 |
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| End bp | 508520 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470668 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001155298 |
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| Protein GI | 145588701 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATACG TAGCCCCAGT AAAAGATATG TTGTTTGCGA TGAATGAATT AGCTGGGCTA
TCTGAGGTTG TTGCTTACCC TACCTATGCC GAGGCTGGTG CTGATGTTGA TCTGGCCCCA
GCCATTTTGG AAGAGGCAGC AAAATTTAAT CAAGATGTTG TTGCACCCCT TAACTGGCCT
GGAGATCAAA ACCCAAGCTC ATTTAAAGAG GGGGTAGTAA CAACAGCCCC GGGTTTTAAA
GAGGCCTTTG AGCAATTTGG ATCTGCTGGT TGGCAGGGTG TTGTACATCC CGCAGAATTT
GGTGGTCAGG GATTACCAAA GTTAATTGCA ACGGCTTGTT TTGAAATGGT GCACTCTGCA
AGCCTGTCAT TTGCCTTGTG CCCCATGTTG ACTGATGGTG CTATTGAAGC GTTATTAACT
GCAGCAAGTC CAGAGCTGCT AGAGCGTTTT GTTCCGAACA TGATCTCTGG TGAGTGGACT
GGCTCGATGT GCTTAACAGA GCCACAAGCT GGTTCTGATT TATCTATGGT GCGTGCACGT
GCAGTGCCAG AGGGTAATGG CGCTTACAAG ATATTTGGTA CCAAGATTTA TATTACTTAC
GGCGAACACG ATATGGCAAA GAATATTGTC CATTTAGTGT TGGCGAGAAC ACCTGATGCA
CCCGAGGGCG TAAAGGGTAT CTCATTATTT GTAGTGCCTA AATTCTTAGT GAATGCTGAT
GGTTCATTGG GTGACCGCAA TGATGTGCAT TGTGTATCTA TTGAACATAA GCTTGGAATT
AAAGCTAGTC CAACGGCTGT ATTGCAATTT GGTGATCATG GTGGCGCTAT TGGTTATTTA
GTTGGCGAAG AAAATCGCGG TCTCGAATAC ATGTTTGTGA TGATGAATGC AGCACGCTTT
GCTGTTGGCA TGCAGGGTAT AGCAGTTGCT GAGCGTGCCT ATCAAAAAGC GGTGCAGTAT
GCAAAAGATC GCGTGCAAAG TCGTGACCTG GCAGGATCGC CAGGCCCGGT AGCGATTATT
CATCAGCCTG ATGTGAAGCG AATGTTAATG ACAATGCGCG CCTATACCGA AGCTTCACGT
GCTTTAGCGT ATTACGCCGC TGCTGCATAT GATGCACAGC ATGCTGACCC AGATGAAGCG
GTCAAAAAAG CCAATCAAGC GATTTATGAA TTCTTGGTAC CTATTGTTAA GGGCTTTTCT
ACGGAGATGT CCATCGAGGT TGCTAGTTTA GGGGTGCAGG TCCATGGTGG CATGGGCTTT
ATAGAGGAGA CTGGTGCAGC ACAGCATTAT CGCGATGCAC GCATTCTGAC TATTTATGAA
GGCACAACAG CGATTCAAGC GAATGATCTA GTGGGTAGAA AAACAGTTCG TGATGGTGGT
GCAACTGCTA AAGTGCTCTC ACAAAAAATT GCTGAGACTG AAAAAGAATT GGCAGCTAGT
AGTTCTGCCG ATGCTCAAGC GGTACTTAAG CAACTAACTT TAGCGCGTGC TGCATTTGAA
GAGGCAGTCG CGTATATTTT GGCAAATGCT AAGAGCGATG TTAAAGCGGT ATACGCAGGC
AGCTTTGCTT ATTTGCGCTT AGCAGGCTTG GTATTGGGTG GCTGGCAAAT GGCGCGAGGA
TTATTGGCTG CAGAACGTTT GCGTGAAACT GATCCGAGCT TTTATAGCGC AAAAATTGCG
ACAGCCCGTT TCTTTGCAGA GAATTTAATG CCTCAGACGC AAGCGTTGGC AACCTCTATT
GTTGAAAGTG GGTATTCAAC CAATGCACTG GAAGTAGAGC AGTTTTAA
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| Protein sequence | MPYVAPVKDM LFAMNELAGL SEVVAYPTYA EAGADVDLAP AILEEAAKFN QDVVAPLNWP
GDQNPSSFKE GVVTTAPGFK EAFEQFGSAG WQGVVHPAEF GGQGLPKLIA TACFEMVHSA
SLSFALCPML TDGAIEALLT AASPELLERF VPNMISGEWT GSMCLTEPQA GSDLSMVRAR
AVPEGNGAYK IFGTKIYITY GEHDMAKNIV HLVLARTPDA PEGVKGISLF VVPKFLVNAD
GSLGDRNDVH CVSIEHKLGI KASPTAVLQF GDHGGAIGYL VGEENRGLEY MFVMMNAARF
AVGMQGIAVA ERAYQKAVQY AKDRVQSRDL AGSPGPVAII HQPDVKRMLM TMRAYTEASR
ALAYYAAAAY DAQHADPDEA VKKANQAIYE FLVPIVKGFS TEMSIEVASL GVQVHGGMGF
IEETGAAQHY RDARILTIYE GTTAIQANDL VGRKTVRDGG ATAKVLSQKI AETEKELAAS
SSADAQAVLK QLTLARAAFE EAVAYILANA KSDVKAVYAG SFAYLRLAGL VLGGWQMARG
LLAAERLRET DPSFYSAKIA TARFFAENLM PQTQALATSI VESGYSTNAL EVEQF
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