| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3132 |
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| Symbol | |
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| ID | 3965532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4005201 |
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| End bp | 4006970 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922229 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | YP_528601 |
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| Protein GI | 90022774 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATT ATCGCGCGCC GCTAGAAGAT ATTCGTTTTG TGTTAAAACA TGTGTTTAAT
GTTGAAGAGT TTTGGCAAGG CCTAGAAGGC ATGGGCGACA TGGATATAGA CACCGCCGAT
GCCATTTTGG AAGAAGCGGC AAAAATATGC GAAGAAGTAT TAGCACCGTT AAATCGCGAA
GCTGATGAGC AAGGTAGCCA GTGGAGCGAG GGTAACGTTA CCAGCCCAGA AGGGTTTAAA
GACGCCTACC AAACATTTTG CGAAGGCGGT TGGAACGGCT TAGGTGGTAA CCCAGAATAC
GACGGTATGG GCATGCCCAA AACGCTCGTT GCCGCTGTTG AAGAAATGCT ACAGGGCAGT
TGTATTGCCT TTGGTTTAGC GCCCATGCTT ACCGCGGGTG CAAGCTTTGC TATTAACGCG
CACGCAAGCG ACGAATTAAA AGCACTGTAT TTACCCAAAA TGTACAGCGG TGAATGGGCG
GGCGCGATGG ATTTAACCGA ACCCCACGCA GGCACCGACC TAGGCTTAAT TCGTACTAAA
GCCCAGCCGC AGGCCGATGG CAGCTATGCC ATTACAGGTA CAAAAATATT TATTACCTGG
GGCGAGCACG ACATGGCCGA CAATATTGTG CACCTAGTGT TGGCTAAATT ACCCGATGCC
CCTGCCGGCT CGCGCGGCAT ATCGTTATTT TTGGTTCCAA AAGTTATCCC CAATGCCGAT
GGCAGTTTAG GGGCACGCAA TGGCGTTAGC TGTGGTTCCA TCGAGAAAAA AATGGGTATT
AAAGCTTCGG CAACCTGCGT AATGAATTTT GATGGCGCAC AGGGCTGGCT TGTTGGTGAA
CCCAACAAGG GGTTAATGGC CATGTTTACC ATGATGAATT ACGAGCGTTT AATGGTGGGT
GTGCAGGGCA TTAGCGTTGC AGAAGCCTCG TATCAAAACG CGGCGGAGTA TGCCAAAGAG
CGCATTCAAA GCCGCTCGCC AAGCGGCCCG CAAATGCCAG ATAAAGAAGC AGATTCGCTG
CTTGTGCACC CAGACGTACG CCGCATGTTA ATGACCATGC GCGCCTATAA CGAAGGCGGT
CGCGCTTTTT ATATTTATGT TGCCCGTTGG TTAGATACCG CCAAATACGG TGCAACCGAA
GAGCTACGTA AACACGCCGA TAACATGGTG GCACTACTCA CGCCTGTTGC AAAAGCATTT
ATGACCGATG TTGCCTTCGA CTCGGCAGTG ATGGGTCAGC AGGTGTATGG CGGCCATGGG
TATATTCGCG AATGGGGCCA AGAGCAACAT GTGCGCGACA TTCGTATTAC CCAAATATAC
GAAGGTACCA ATGGTATTCA GGCTATGGAT TTAATTGGCC GTAAAACATT GGCGGTGGAT
GGTGGTTTGT TAGCGTTGTT GGCTGAGGAG ATACGCGCAT ATTGCGCCAG TGCTGGTGAC
GACCACTCTC ATTTGGCCGA AGCATTGCTC TGCGCGTTAG AGGGGCTGGA AGCAAGCACT
CAACATATAT TGTCTGCAAG CAAGCAAGAC CCGAATTACC CTGGAGCAAT AGCGTGCGAT
TACCTCCACT ATGTAGGTTA TGTTGCCTAT GGCTATATGT GGCTGCAAAT GGCGTGTGCG
GCTAAGCAAT CTTCAAGCGC GCAAGCACAG GCTAAACCAG CGCTGGCGGA ATTTTTCTTC
GCTTATTTAT TGCCGCAGGT AGCTACTTTA CAGCAGCGGA TAGAATCCGG TGCGAGTTCG
GTTATGGGCT TGCCTATGGA TGCTTTCTAG
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| Protein sequence | MADYRAPLED IRFVLKHVFN VEEFWQGLEG MGDMDIDTAD AILEEAAKIC EEVLAPLNRE
ADEQGSQWSE GNVTSPEGFK DAYQTFCEGG WNGLGGNPEY DGMGMPKTLV AAVEEMLQGS
CIAFGLAPML TAGASFAINA HASDELKALY LPKMYSGEWA GAMDLTEPHA GTDLGLIRTK
AQPQADGSYA ITGTKIFITW GEHDMADNIV HLVLAKLPDA PAGSRGISLF LVPKVIPNAD
GSLGARNGVS CGSIEKKMGI KASATCVMNF DGAQGWLVGE PNKGLMAMFT MMNYERLMVG
VQGISVAEAS YQNAAEYAKE RIQSRSPSGP QMPDKEADSL LVHPDVRRML MTMRAYNEGG
RAFYIYVARW LDTAKYGATE ELRKHADNMV ALLTPVAKAF MTDVAFDSAV MGQQVYGGHG
YIREWGQEQH VRDIRITQIY EGTNGIQAMD LIGRKTLAVD GGLLALLAEE IRAYCASAGD
DHSHLAEALL CALEGLEAST QHILSASKQD PNYPGAIACD YLHYVGYVAY GYMWLQMACA
AKQSSSAQAQ AKPALAEFFF AYLLPQVATL QQRIESGASS VMGLPMDAF
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