| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2498 |
|---|
| Symbol | |
|---|
| ID | 5153320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 2581127 |
|---|
| End bp | 2582905 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640557410 |
|---|
| Product | putative acyl-CoA dehydrogenase |
|---|
| Protein accession | YP_001238565 |
|---|
| Protein GI | 148253980 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.242453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTATC GCGCCCCGCT CAACGACATG CTGCTCGCCC TCAATCATGG CGCCGGGCTG
AAGGCGGCGG TCGAGGCCGG TCATTACGGC GATTTCGACC CCGACATCAC CGCCGCCGTG
CTCGAGGAGG CCGGCAAGTT CGCCACCGAC GTGCTGGCCC CGCTGAACAA GGTCGGCGAC
AGGAACGGCG TCAAGCTCGC CGACAAGAAG GTCACCACCG CCCCCGGCTG GCCGGATGCG
TATAAGCGCT GGACCGAGGC CGGCTGGAAC GCCGTGTCCG GCCCGGAGAC CCATGGCGGC
CAGGGCCTGC CGCTCGCCAT CAACGCTGCC TGCACCGAGA TCTGGAGCGC AGCCAACGTC
GCCTTCGGCC TGTGTCCGCT GCTGACGCTC TCGGCCATCG AGGCGCTCGA CGCCCATGGC
AGCCAGGAAC TGAAGGACAT CTATCTCGGC AAGCTGATCT CCGGCGAATG GACCGGCACC
ATGCAGCTGA CCGAGCCGCA GGCCGGCTCC GACGTCGGCG CCTTGCGCAC CCGCGCCGAG
CGCGCCCCCG ACGGCAGCTA CCGCATCACC GGCAGCAAGA TCTTCATCAC CTATGGCGAC
CACGACATGA CCGACAACAT CGTGCATTTC GTGCTCGCGC GGCTGCCGGA CGCGCCGGCC
GGCACCAAGG GCATTTCGCT CTTCCTCATT CCGAAATTCC TCGTCAACAA GGACGGCTCG
CTCGGCGCCC GCAACGACAT CTATCCGAGC GGCATCGAGC ACAAGCTCGG CATGCACGCC
TCGCCGACCT GCACCATGAC GATGGGCGAC CATGGCGGCG CCATCGGCTA TCTCATCGGC
CAAGAGAATG CCGGCATGCG CTGCATGTTC ACGATGATGA ACCAGGCCCG GCTCGGCGTC
GGCCTCGAAG GCGTCGGCGT CGCCGATCGC GCCTATCAGC AGGCGCTCGC CTATGCGCAG
GACCGCAAGC AGGGCCGCGC CGTCGGCAGC AAGGGCAGCG GCTCGGACGC GATCATCGCC
CATCCCGACG TCAAGCGCAT GCTGATGCAG ATGCGCTCGC TGACAGCCGC CTCGCGCTCG
ATCTGCTACG CGACCGCGGT GGCGCTCGAT GTCGCCGTGC GCGCCAAGGA TCCGGCCGTC
CGCGCGGAAG CCGCCGCGCG CGGCGCGCTG CTGACGCCGA TCGCCAAGGC CTTCTCGACC
GACATCGGCA ACGAGGTCGC CTATCTCGGC GTCCAGATCC ATGGCGGCAT GGGCTTCATC
GAGGAGACCG GCGCCGCCCA GCATTATCGC GACGCCCGCA TCACCGCGAT CTATGAGGGC
ACCAACGGCA TCCAGGCGAT CGACCTCGTG ACACGCAAAC TGGGCGCGAA TGGCGGCGCC
TCGGTGTTCA AGCTGCTGGA CGAGCTCACC GACATCGTCC GCCGTGTCGA GGCCTCGAAC
GACCCGGCCT TCGGCACCAC CGGCGCCAAG CTGCGCGAGG CGCTGAGCGC GCTCGAGCGT
TCCAGCCGCT GGCTGTTGGA GAAGCTCGGC ACCGCACCGA ACGACGCGCT CGCCGGCGCC
ACGCCTTATC TCCGCCTGTT CGGCTCGGCG CTCGGCGGCT GCATGCTGGC CAATGAGGCG
CTCGCCGCGC GCAGCGAGAA CGAGACCGCG GGTGCGCGTC ATGTGGCGCT GGCGCGGTTC
TTTGCCGAGA CGTTTGCCGT GCAGGCGCCG TCGCTGGAAA AGACCGTTAC CGACGGCGCG
GACGCAGTGC TCGCGGCGGA GGCCGTGCTG GTGGCGTGA
|
|---|
| Protein sequence | MTYRAPLNDM LLALNHGAGL KAAVEAGHYG DFDPDITAAV LEEAGKFATD VLAPLNKVGD
RNGVKLADKK VTTAPGWPDA YKRWTEAGWN AVSGPETHGG QGLPLAINAA CTEIWSAANV
AFGLCPLLTL SAIEALDAHG SQELKDIYLG KLISGEWTGT MQLTEPQAGS DVGALRTRAE
RAPDGSYRIT GSKIFITYGD HDMTDNIVHF VLARLPDAPA GTKGISLFLI PKFLVNKDGS
LGARNDIYPS GIEHKLGMHA SPTCTMTMGD HGGAIGYLIG QENAGMRCMF TMMNQARLGV
GLEGVGVADR AYQQALAYAQ DRKQGRAVGS KGSGSDAIIA HPDVKRMLMQ MRSLTAASRS
ICYATAVALD VAVRAKDPAV RAEAAARGAL LTPIAKAFST DIGNEVAYLG VQIHGGMGFI
EETGAAQHYR DARITAIYEG TNGIQAIDLV TRKLGANGGA SVFKLLDELT DIVRRVEASN
DPAFGTTGAK LREALSALER SSRWLLEKLG TAPNDALAGA TPYLRLFGSA LGGCMLANEA
LAARSENETA GARHVALARF FAETFAVQAP SLEKTVTDGA DAVLAAEAVL VA
|
|---|
| |