More than 300 homologs were found in PanDaTox collection
for query gene PputW619_3353 on replicon NC_010501
Organism: Pseudomonas putida W619



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  82.15 
 
 
593 aa  979    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  55.52 
 
 
598 aa  677    Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  57.43 
 
 
592 aa  655    Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  55.85 
 
 
593 aa  644    Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
594 aa  1222    Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  72.9 
 
 
593 aa  850    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  54.01 
 
 
598 aa  610  1e-173  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.01 
 
 
594 aa  599  1e-170  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  51.09 
 
 
596 aa  598  1e-169  Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.85 
 
 
594 aa  597  1e-169  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  51 
 
 
596 aa  592  1e-168  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.09 
 
 
597 aa  589  1e-167  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  50.93 
 
 
596 aa  585  1e-166  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  52.56 
 
 
600 aa  588  1e-166  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  50.67 
 
 
596 aa  587  1e-166  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  50.67 
 
 
596 aa  587  1e-166  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  50.67 
 
 
596 aa  587  1e-166  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  50.5 
 
 
596 aa  587  1e-166  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  50.33 
 
 
595 aa  588  1e-166  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  51.6 
 
 
597 aa  587  1e-166  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  50.42 
 
 
596 aa  585  1.0000000000000001e-165  Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
596 aa  578  1e-164  Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
596 aa  578  1e-164  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  50.75 
 
 
596 aa  578  1e-164  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  51.02 
 
 
596 aa  577  1.0000000000000001e-163  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  51.02 
 
 
596 aa  577  1.0000000000000001e-163  Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  50.59 
 
 
596 aa  577  1.0000000000000001e-163  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  50.17 
 
 
596 aa  575  1.0000000000000001e-163  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  51.34 
 
 
594 aa  577  1.0000000000000001e-163  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  50.42 
 
 
596 aa  572  1.0000000000000001e-162  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  49.92 
 
 
596 aa  572  1.0000000000000001e-162  Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  49.92 
 
 
596 aa  572  1.0000000000000001e-162  Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  49.58 
 
 
596 aa  575  1.0000000000000001e-162  Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  50.59 
 
 
596 aa  575  1.0000000000000001e-162  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
596 aa  570  1e-161  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  49.92 
 
 
596 aa  571  1e-161  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  49.92 
 
 
596 aa  570  1e-161  Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  51.52 
 
 
614 aa  565  1e-160  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
596 aa  568  1e-160  Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  49.75 
 
 
596 aa  564  1.0000000000000001e-159  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  51.02 
 
 
594 aa  564  1.0000000000000001e-159  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  50.42 
 
 
596 aa  562  1.0000000000000001e-159  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  53.08 
 
 
595 aa  562  1.0000000000000001e-159  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  48.84 
 
 
605 aa  561  1e-158  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  49.08 
 
 
586 aa  554  1e-156  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  48.72 
 
 
593 aa  548  1e-155  Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  47.41 
 
 
586 aa  551  1e-155  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  49.92 
 
 
595 aa  547  1e-154  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  49.92 
 
 
595 aa  545  1e-154  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  50.53 
 
 
593 aa  548  1e-154  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  48.91 
 
 
594 aa  543  1e-153  Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  49.48 
 
 
593 aa  542  1e-153  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  48.99 
 
 
594 aa  540  9.999999999999999e-153  Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  49.15 
 
 
592 aa  541  9.999999999999999e-153  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  50 
 
 
594 aa  535  1e-151  Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  47.75 
 
 
600 aa  538  1e-151  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  51.77 
 
 
579 aa  536  1e-151  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  48.3 
 
 
615 aa  531  1e-149  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  51.3 
 
 
593 aa  529  1e-149  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  47.8 
 
 
592 aa  528  1e-148  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  47.78 
 
 
594 aa  528  1e-148  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  48.9 
 
 
596 aa  524  1e-147  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  49.57 
 
 
587 aa  520  1e-146  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  50.43 
 
 
587 aa  520  1e-146  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  49.57 
 
 
587 aa  519  1e-146  Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
592 aa  516  1.0000000000000001e-145  Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  50.95 
 
 
592 aa  514  1e-144  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_008254  Meso_0723  acyl-CoA dehydrogenase-like  49.72 
 
 
591 aa  512  1e-144  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  46.64 
 
 
592 aa  508  1e-143  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  47.75 
 
 
592 aa  508  1e-143  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  47.58 
 
 
592 aa  506  9.999999999999999e-143  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  49.34 
 
 
593 aa  508  9.999999999999999e-143  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  48.96 
 
 
593 aa  505  9.999999999999999e-143  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  45.61 
 
 
600 aa  508  9.999999999999999e-143  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  47.19 
 
 
592 aa  505  9.999999999999999e-143  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  47.64 
 
 
592 aa  503  1e-141  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  45.92 
 
 
626 aa  500  1e-140  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  48.59 
 
 
593 aa  497  1e-139  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  47.96 
 
 
589 aa  493  9.999999999999999e-139  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  45.47 
 
 
591 aa  488  1e-137  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  49.06 
 
 
589 aa  491  1e-137  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  44.26 
 
 
596 aa  483  1e-135  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009831  Ssed_2696  acyl-CoA dehydrogenase domain-containing protein  44.71 
 
 
596 aa  484  1e-135  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  43.36 
 
 
596 aa  481  1e-134  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_010506  Swoo_1916  acyl-CoA dehydrogenase domain-containing protein  44.18 
 
 
596 aa  480  1e-134  Shewanella woodyi ATCC 51908  Bacteria  normal  0.839569  normal  0.565849 
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  46.41 
 
 
593 aa  479  1e-134  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2552  acyl-CoA dehydrogenase domain-containing protein  45.32 
 
 
596 aa  480  1e-134  Shewanella sp. ANA-3  Bacteria  normal  0.0690519  normal 
 
 
-
 
NC_008321  Shewmr4_2387  acyl-CoA dehydrogenase domain-containing protein  45.49 
 
 
596 aa  482  1e-134  Shewanella sp. MR-4  Bacteria  normal  0.109961  normal 
 
 
-
 
NC_008322  Shewmr7_2459  acyl-CoA dehydrogenase domain-containing protein  44.63 
 
 
596 aa  479  1e-134  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00932419 
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  43.14 
 
 
597 aa  476  1e-133  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  42.36 
 
 
597 aa  478  1e-133  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  45.49 
 
 
572 aa  478  1e-133  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  43.45 
 
 
597 aa  473  1e-132  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2768  acyl-CoA dehydrogenase family protein  44.77 
 
 
596 aa  474  1e-132  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  43.45 
 
 
597 aa  473  1e-132  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  43.47 
 
 
597 aa  473  1e-132  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_009901  Spea_1852  acyl-CoA dehydrogenase domain-containing protein  42.93 
 
 
596 aa  470  1.0000000000000001e-131  Shewanella pealeana ATCC 700345  Bacteria  normal  0.265206  n/a   
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  45.36 
 
 
591 aa  469  1.0000000000000001e-131  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  43.07 
 
 
594 aa  469  1.0000000000000001e-131  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  44.19 
 
 
596 aa  470  1.0000000000000001e-131  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
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