| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2387 |
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| Symbol | |
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| ID | 4252958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2848303 |
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| End bp | 2850093 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119019 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_734515 |
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| Protein GI | 113970722 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.109961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCT ATCAAGCACC ACTACGTGAC TATCAATTTA TCCTCGATGA AATGTTGCAT
ATTTATCAGC AAGATGCTCT TAAAGGCTTC GATGAAATCG CCCCCGATCT GGTCGATGCC
ATCCTTCAAG GTATGGCGGA TTTCAGTACT GAGGTGATGT TGCCGTTAAA TAGCGTGGGG
GATGTGCAGG GCTGCAAACT CGTGGATAGT AAAGTGGTTA CCCCCGAAGG TTTTGCCGAC
GCCTATCAGC AATTTGTCGA CAATGGCTGG CCGACACTGA CCTGCGATCC CGCCTATGGT
GGTCAAGGAC TGCCCGAAGT GGTCGGGATT TTTGCCACCG AGATGCAAAC CTCGACCAAC
ATGGCTTTTG CCATGTATCC CGGCCTTACC CATGGCGCCT ATTCGGCCAT TCACGCCCAC
GGCAGTGAGG CACTTAAACA GAAATACTTA GCCAAATTAG TGAGTGGTGA ATGGACTGGC
ACCATGAACC TCACCGAATC CCATGCCGGA ACCGATTTAG CGCTATTGCG CACTAAGGCC
GTTCCCGCGG CGGACGGCTA CTTTGCCATC ACTGGGGAGA AGATTTTTAT TTCCTCGGGT
GACCATCAAT TTACCGATAA CATAGTGCAT CTGGTACTCG CCCGTTTACC CGACGCGCCC
GAAGGTGTGA AGGGGATTTC ACTGTTTGCC GTGCCCAAAG TGTTAGTGAA CAGTGATGGT
AGTTTAGGAG AGGCGAACAG CCTCTATGCT AGCGGTCTTG AGCACAAAAT GGGGATCCAT
GGCAACTCAA CCTGCGTGAT GGTATTTGAG GGGGCACTCG GTGAGTTAGT CGGCGAACCC
CACCAAGGGT TGCGCGCGAT GTTTACCATG ATGAACCAAG CACGCTTAGG TGTTGGGATG
CAGGGGTTAG GCGTGTCCGA AATCGCCTAT CAAAACGCTT TAGCCTATGC CAAGGACAGA
TTGCAGAGCC GCGCCATCAG TGGCGCTAAA GCGCCTGAAA AAGCCGCCGA TCCGATTTTG
GTACACGGTG ATGTGCGCCG GATGTTGTTA TCGCAAAAAG CCTTTAATGA AGGTGCCCGT
GCACTCGTTG GCCAGCAGGC ACTGTGGCTC GATGAGGCTG AGCGCCATAG CGATCCTGCC
AAGGCGAAAG TGGCTGCCCA GTTAGCGGCG TTATTTACCC CGGTGGTGAA AGGCTTTATC
ACTAATCGTG GCTTTAATGC CTGTGTGGAT GCCCAGCAAG TGTTTGGCGG TCATGGCTAT
ATCCACGAGT GGGGAATGGA GCAGTTTGTG CGTGATAGCC GCATCGCTTT GATTTATGAA
GGCACGAATG GCATTCAGGC GCTCGATTTA GTTGGGCGTA AGCTGCTGAG CGATCGCGGC
GCTGCCATGC AGCAATGGTC AGCGCTAGTG ACTGAGTTCA TTCAATCACA GGGCAAAGAT
CCGCAAATGC AGCCCTATGT GAGCGGGCTA ATGGATTGCG CCACCGATTT ACAAAAGGCG
AGTGGTTATT TAGCGACCCA TGCAGCGAGC AATCCCGACA TTATCGGCGC GGCATCGATG
GCGTATCTGG AGTTATTTGG CATTACCGCC CTTGCGTGGA TGTGGGCTCG TATGGCTAAG
ATTGCCCTGA CTGCGCTCGA AAATGGCACG CAAGAGACCG ACTTTTATCA AGCTAAACTG
AAAACGGCGG ACTTTTATAT GGCGTATTGG GCCGTGCAAA GCCGTAGCCT GCGTAAACAG
TTGGAGCAGG CAAGTGAGAT GTTAACAACG CTCGACGAGG CTATTTTTTA A
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| Protein sequence | MPVYQAPLRD YQFILDEMLH IYQQDALKGF DEIAPDLVDA ILQGMADFST EVMLPLNSVG
DVQGCKLVDS KVVTPEGFAD AYQQFVDNGW PTLTCDPAYG GQGLPEVVGI FATEMQTSTN
MAFAMYPGLT HGAYSAIHAH GSEALKQKYL AKLVSGEWTG TMNLTESHAG TDLALLRTKA
VPAADGYFAI TGEKIFISSG DHQFTDNIVH LVLARLPDAP EGVKGISLFA VPKVLVNSDG
SLGEANSLYA SGLEHKMGIH GNSTCVMVFE GALGELVGEP HQGLRAMFTM MNQARLGVGM
QGLGVSEIAY QNALAYAKDR LQSRAISGAK APEKAADPIL VHGDVRRMLL SQKAFNEGAR
ALVGQQALWL DEAERHSDPA KAKVAAQLAA LFTPVVKGFI TNRGFNACVD AQQVFGGHGY
IHEWGMEQFV RDSRIALIYE GTNGIQALDL VGRKLLSDRG AAMQQWSALV TEFIQSQGKD
PQMQPYVSGL MDCATDLQKA SGYLATHAAS NPDIIGAASM AYLELFGITA LAWMWARMAK
IALTALENGT QETDFYQAKL KTADFYMAYW AVQSRSLRKQ LEQASEMLTT LDEAIF
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