| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2459 |
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| Symbol | |
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| ID | 4256170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2913879 |
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| End bp | 2915669 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123134 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_738501 |
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| Protein GI | 114047951 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00932419 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGTCT ATCAAGCACC ACTACGTGAC TATCAATTTA TCCTCGATGA AATGTTGCAT
ATTTATCAGC AAGATGCCCT AAAAGGCTTC GATGAAATCG ACCCCGATCT GGTCGATGCC
ATCCTGCAAG GTATGGCGGA TTTCAGTACT GAGGTGATGT TGCCGTTAAA TAGCGTGGGG
GATGTGCAGG GCTGCAAACT CGTGGATGGT AAAGTGGTTA CCCCAGAAGG TTTTGCCGAC
GCCTATCAGC AGTTTGTCGA CAATGGCTGG CCGACACTGA CCTGCGATCC CGCCTACGGT
GGTCAAGGAC TGCCCGAAGT AGTCGGGATT TTTGCCACCG AGATGCAAAC CTCGACCAAC
ATGGCCTTTG CCATGTATCC CGGCCTTACC CATGGCGCCT ATTCGGCCAT TCATGCCCAC
GCCGGTGAGG CACTTAAACA GAAATACTTA GCCAAATTAG TAAGTGGTGA ATGGACTGGC
ACCATGAACC TCACCGAATC CCATGCCGGA ACCGATTTAG CGCTACTGCG CACTAAGGCC
GTTCCCGCGG CGGATGGCTA CTTTGCCATC ACTGGGGAGA AGATTTTTAT TTCCTCGGGT
GACCATCAAT TTACCGATAA CATAGTGCAT CTGGTACTCG CCCGTTTACC CGACGCGCCC
GAAGGTGTGA AGGGGATTTC GCTGTTTGCC GTGCCCAAAG TGTTAGTGAA CAGTGATGGC
AGTTTAGGTG AGGCGAACAG CCTCTATGCC AGTGGCCTTG AGCACAAAAT GGGGATCCAC
GGCAACTCAA CCTGCGTGAT GGTATTTGAG GGGGCACTCG GTGAGTTAGT CGGCGAACCC
CACCAAGGTC TGCGCGCCAT GTTTACCATG ATGAACCAAG CACGCTTAGG TGTTGGGATG
CAGGGGTTAG GCGTGTCCGA AATCGCCTAT CAAAGCGCCT TGGCCTACGC CAAGGACAGA
TTGCAGAGCC GCGCCATTAG TGGCGCTAAA GCGCCCGAAA AAGCCGCCGA TCCGATTTTG
GTTCACGGTG ATGTGCGCCG TATGTTGTTA TCGCAAAAAG CCTTTAACGA AGGTGCCCGT
GCACTCGTTG GCCAGCAGGC GCTGTGGCTC GATGAGGCTG AGCGCCATAG CGATCCAGCC
AAGGCGAAAG TGGCTGCCCA GTTAGCGGCC TTATTTACTC CAGTGGTGAA AGGCTTTATC
ACTAATCGTG GCTTTAATGC CTGTGTGGAT GCCCAGCAAG TGTTTGGTGG TCATGGCTAT
ATCCACGAGT GGGGAATGGA GCAGTTTGTG CGTGATAGCC GCATCGCTTT GATTTATGAA
GGCACGAATG GCATTCAGGC GCTCGATTTA GTTGGGCGTA AGCTGCTGAG CGATCGCGGC
GCTGCCATGC AGCAATGGTC AGCGCTAGTG ACTGAGTTCA TTCAATCACA GGGCAAAGAT
CCGCAAATGC AGCCCTATGT GAGCGGGCTA ATGGATTGCG CCACCGATTT ACAAAAGGCG
AGCGGTTATT TAGCGACCCA TGCAGCGAGC AATCCCGATA TTATCGGCGC GGCATCGATG
GCGTATCTGG AGTTATTTGG CATTACCGCC CTCGCGTGGA TGTGGGCGCG TATGGCAAAG
ATTGCCCTGA CGGCACTCGA AAATGGCACG CAAGAGACCG ACTTTTATCA AGCTAAACTG
AAAACGGCGG ACTTTTATAT GGCGTATTGG GCCGTGCAAA GCCGTAGCCT GCGTAAACAG
TTGGAGCAGG CGAGTGAGAT GTTAACAACG CTTGATGACG CTATTTTTTA A
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| Protein sequence | MPVYQAPLRD YQFILDEMLH IYQQDALKGF DEIDPDLVDA ILQGMADFST EVMLPLNSVG
DVQGCKLVDG KVVTPEGFAD AYQQFVDNGW PTLTCDPAYG GQGLPEVVGI FATEMQTSTN
MAFAMYPGLT HGAYSAIHAH AGEALKQKYL AKLVSGEWTG TMNLTESHAG TDLALLRTKA
VPAADGYFAI TGEKIFISSG DHQFTDNIVH LVLARLPDAP EGVKGISLFA VPKVLVNSDG
SLGEANSLYA SGLEHKMGIH GNSTCVMVFE GALGELVGEP HQGLRAMFTM MNQARLGVGM
QGLGVSEIAY QSALAYAKDR LQSRAISGAK APEKAADPIL VHGDVRRMLL SQKAFNEGAR
ALVGQQALWL DEAERHSDPA KAKVAAQLAA LFTPVVKGFI TNRGFNACVD AQQVFGGHGY
IHEWGMEQFV RDSRIALIYE GTNGIQALDL VGRKLLSDRG AAMQQWSALV TEFIQSQGKD
PQMQPYVSGL MDCATDLQKA SGYLATHAAS NPDIIGAASM AYLELFGITA LAWMWARMAK
IALTALENGT QETDFYQAKL KTADFYMAYW AVQSRSLRKQ LEQASEMLTT LDDAIF
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