| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0925 |
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| Symbol | |
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| ID | 1219733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 976328 |
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| End bp | 978112 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637237287 |
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| Product | putative acyl-CoA dehydrogenase oxidoreductase protein |
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| Protein accession | NP_519046 |
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| Protein GI | 17545644 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.349332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATC AAGCCCCCGT CAAGGACATG CTGTTCGCAA TGAACGAACT GGCCGGCCTG
GACAACGTCG CCAGGCTGCC CGGCTTCGAG GAGGCCACCG CCGACACCGC GCAGGCCGTG
CTGGAGGAGA GCGCGCGCTT CACCGGCGAG GTGATCGCCC CGCTGAACGT GGAGGGCGAC
CGCAACCCGA GCCGCTGGAA GGATGGCACG GTGACGGCCA GCGCGGGCTT CAAGGAAGCC
TTCCAGCAGT TCGGCCAGGG CGGCTGGCAG GGCGTGCAGC ATCCGGTCGA ATACGGCGGC
CAGGGTTTGC CCAAGCTGAT CGCCACGGCC TGCATCGAAA TGCTGAACGC GGCCAACCTG
TCGTTCGCGC TGTGCCCGCT GCTGACCGAC GGCGCCATCG AGGCGCTGCT GACGGCCGGC
AGCGAGGCGC AGAAGCAGCT TTATGTGCCG AAGCTGATCT CGGGCGAGTG GACCGGCACG
ATGAACCTGA CCGAGCCGCA GGCCGGCTCC GACCTCGCCC TGGTGCGCAC GCGTGCCGAG
CCGGTGGGCG ACGGCACCTT CAAGGTCTTC GGCACGAAGA TCTTCATCAC CTGGGGCGAG
CACGACATGG CCGGGAACAT CGTCCACCTG GTGCTGGCGC GCACGCCGGG CGCGCCGGAG
GGCGTGAAGG GCATTTCGCT GTTCGTGGTG CCCAAGTTCC TGGTCAATGC GGATGGCTCG
CTGGGCGCGC GTAATGACGT GCACTGCGTG TCGATCGAGC ACAAGCTCGG CATCAAGGCG
AGCCCGACCG CCGTGCTGCA GTTCGGCGAC CATGGCGGCG CCATCGGCAC GCTGGTCGGC
GAGGAGAACC GCGGCCTGGA ATACATGTTC ATCATGATGA ACGCGGCGCG CTATGCGGTC
GGCATGCAGG GCATCGGTGT GTCGGAGCGC GCTTACCAGA AGGCTGTGGC CTATGCGCGC
GAGCGCGTGC AGAGCCGTCC GGTGGATGGC TCGGCGGCCA AGGCGGTGCC GATCATCCAC
CACCCGGACG TCAAGCGCAT GCTGCTGACC ATGCGCGCCA TGACCGAAGG CGCCCGCGCG
CTGGCCTACG TGGCCGCTGC CGCGTGCGAT GCCGGCCACC ACGCTGCCGA TGACGCCACG
CGCAAGCAGA ACGAGGCGCT GTACGAATTC CTCGTGCCGG TCGTGAAGGG CTGGAGCACC
GAGATGTCGA TCGACGTGAC CAGCCTCGGC GTGCAGGTGC ACGGCGGCAT GGGCTTCATC
GAGGAGACCG GCGCCGCGCA GTACTACCGC GATGCGCGCA TTCTGCCGAT CTACGAAGGC
ACCACGGCCA TCCAGGCCAA CGATCTGATC GGCCGCAAGA CGGTGCGCGA TGGCGGTGCG
GTGGCGCTGG GCATCTGCGC CGAGATCGCC AGGGTGGAAG CGCAGTTGTC GGCCAAGGGC
GGCGCGCATT GCGAGGCGAT GCGCCAGCGC CTGGGCGCGG GCCGCGAGGC GCTGGAATCG
GTGGTGCGCT TCGTGGTCGC GCAGACCAAG GCGCAGCCCA ATGCCGTGTT CGCCGGCAGC
GTGCCGTACC TGCGGCTGTG CGGCATCGTG CTGTCGGGCT GGCAGATGGC GCGCGCACTG
CTGGCGGCGC TCGACCGCGA GGGCGACGAT CCGAACTTCT ACGGCGCCAA GATCGCCACG
GCGCGCGTGT TTGCCGACGT GCTGCTGACG CAGGCCCCGG GGATCGCGCA GAGCGTCCTG
TCGGGCGGCG AGACCATCGG CGCCGTGCCG GAAGCGCAGT TCTGA
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| Protein sequence | MTYQAPVKDM LFAMNELAGL DNVARLPGFE EATADTAQAV LEESARFTGE VIAPLNVEGD
RNPSRWKDGT VTASAGFKEA FQQFGQGGWQ GVQHPVEYGG QGLPKLIATA CIEMLNAANL
SFALCPLLTD GAIEALLTAG SEAQKQLYVP KLISGEWTGT MNLTEPQAGS DLALVRTRAE
PVGDGTFKVF GTKIFITWGE HDMAGNIVHL VLARTPGAPE GVKGISLFVV PKFLVNADGS
LGARNDVHCV SIEHKLGIKA SPTAVLQFGD HGGAIGTLVG EENRGLEYMF IMMNAARYAV
GMQGIGVSER AYQKAVAYAR ERVQSRPVDG SAAKAVPIIH HPDVKRMLLT MRAMTEGARA
LAYVAAAACD AGHHAADDAT RKQNEALYEF LVPVVKGWST EMSIDVTSLG VQVHGGMGFI
EETGAAQYYR DARILPIYEG TTAIQANDLI GRKTVRDGGA VALGICAEIA RVEAQLSAKG
GAHCEAMRQR LGAGREALES VVRFVVAQTK AQPNAVFAGS VPYLRLCGIV LSGWQMARAL
LAALDREGDD PNFYGAKIAT ARVFADVLLT QAPGIAQSVL SGGETIGAVP EAQF
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