| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4445 |
|---|
| Symbol | |
|---|
| ID | 5425065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4934349 |
|---|
| End bp | 4936229 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640883709 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001419323 |
|---|
| Protein GI | 154248365 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.744679 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0140421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGG TTAGAAGCGG TCCGCCCCCG CTCCCGGTCG CAAGATTGGC GAGCGAAAAG
GCAGGAACAC GAGACACGGG AGCCAACGCC ATGCAGGTCT ATACCCCTCC GCTGCGCGAC
ATGCGCTTCG TCCTCCACGA GCTGCATGGC AGCGCGGAGC TTTCCACCCT CAAGGGGCTG
GAGGAGGTCA CGCCCGACCT CATCGACGCC GTGCTGGAGG AGGCCGGGAA ATTCGTCACC
GAGGTTCTCG CGCCCCTCAA CCAGTCGGGC GACCTCGAAG GCTGCACCTA TGAGAACGGC
GTGGTGCGCA CCCCCAAGGG CTTCAAGGAA GCCTACAAGG CCTTCTGCGA GGGCGGCTGG
AACGGCATCG CCTGCGATCC GCAGTACGGC GGGCAGGGCC TGCCGGCGAG CCTGAACAAG
CTGGTGGAGG AGATGCTGTG CTCCGGCAAC CTCGCCTTCG GCATCTGCCC CGGCCTCACC
CACGGCGCCT ATGAGGCGCT GAAGAATCAC GCCTCGCACG AGCTGAAGGA CCGCTTCCTG
CCGAAGATGG TGGATGGCGT GTGGTCCGGC TCCATGTGCC TCACCGAGCC CCACTGCGGC
ACCGACCTCG GCCTCGTGCG CACCAAGGCC GAGCCGCAAG GCGATGGCTC CTACAAGGTC
ACCGGCAACA AGATCTTCAT CTCCGCCGGC GAGCACGACA TGGCGGAGAA CATCATCCAC
CTGGTGCTGG CCCGCCTGCC GGACGCGCCC AAGGGCATCA AGGGCATCTC CCTGTTCCTG
GTGCCGAAAT TCCTGCCGCG CGAAGATGGA TCCGTGGGCC CGCGCAATGG CGTCACCTGC
ACCGGCATCG AGCACAAGAT GGGCATCCAC GGCTCGTCCA CCTGCCAGAT GTCGTTCGAC
GAGGCCACCG GATGGCTGGT GGGCGAGCCC CACAAGGGCA TGCGCGCCAT GTTCTCCATG
ATGAATTCCG AGCGCCTGTC GGTGGGCACG CAGGGCCTCG GCCTCGGCGA GGCCGCCTAT
CAGGCCGCCG TGGCCTACGC CAAGGAGCGC CTGCAGGGCC GTTCGCTCTC CGGCGCCAAG
CATCCCGACA AGCCGGCCGA TCCCATCATC GTGCACCCGG ACGTGCGGCG CACCCTGATG
ACCATGCGCG CCTATAACGA AGGCTGCCGG GCCCTCGCCG GCTGGGTGGC CCGCGCCCTC
GATCTCATGG AGCACGCGGA AGACGCGCAG GAGCGCCAGC GGGCGGAGGA TTTCACCGCC
CTGATGACCC CCATCGTGAA GGCGCTGTTC ACGGACCTGG GCTTCGAGGC CACCTCCATG
GGCATGCAGG TCTATGGCGG CCACGGCTAC ATCCGCGACC ACGGCATGGA GCAATATGTG
CGCGATGCCC GCATCGCCAT GATCTACGAG GGCACCAACG GGGTGCAGGC GCTCGATCTC
GTGGGCCGCA AGCTGCCGGC GCACATGGGG CGCTATCTGC GCTCCTTCTT CCATCCCGTG
CTGAACTACA TGGACGCCAA GCTCGACGAC GAGAACCTCG GCCCGCTCAT CACCCCGCTC
TCCAAGGCGT TCGGCGCGCT CCAGCTCGCC ACCGCCCACA TCGCCGAGAA GGGCCTGAAG
GACCCGGAGG AGGCGGGCGC GGCGGCGACC CAGTATCTGC GCCTGTTCGG CATGGTGGCG
CTGGGCTACA TGTGGGTGCG CATGGCGGAA GTGGCGTTTG AGAAGCGCGT CTCCAACCCG
GATGACGCCG CCTTCTACGA GGCCAAGATC GCCACCGCGC GCTTCTTCAT GGAGAAGCTG
CTGCCGGACG TGGCGGCGCT GTGGGGCTCC ATCAAGGCCG GAAAGGCCTC CATGATGGCC
CTCGACGAGG CCATGTTCTG A
|
|---|
| Protein sequence | MTAVRSGPPP LPVARLASEK AGTRDTGANA MQVYTPPLRD MRFVLHELHG SAELSTLKGL
EEVTPDLIDA VLEEAGKFVT EVLAPLNQSG DLEGCTYENG VVRTPKGFKE AYKAFCEGGW
NGIACDPQYG GQGLPASLNK LVEEMLCSGN LAFGICPGLT HGAYEALKNH ASHELKDRFL
PKMVDGVWSG SMCLTEPHCG TDLGLVRTKA EPQGDGSYKV TGNKIFISAG EHDMAENIIH
LVLARLPDAP KGIKGISLFL VPKFLPREDG SVGPRNGVTC TGIEHKMGIH GSSTCQMSFD
EATGWLVGEP HKGMRAMFSM MNSERLSVGT QGLGLGEAAY QAAVAYAKER LQGRSLSGAK
HPDKPADPII VHPDVRRTLM TMRAYNEGCR ALAGWVARAL DLMEHAEDAQ ERQRAEDFTA
LMTPIVKALF TDLGFEATSM GMQVYGGHGY IRDHGMEQYV RDARIAMIYE GTNGVQALDL
VGRKLPAHMG RYLRSFFHPV LNYMDAKLDD ENLGPLITPL SKAFGALQLA TAHIAEKGLK
DPEEAGAAAT QYLRLFGMVA LGYMWVRMAE VAFEKRVSNP DDAAFYEAKI ATARFFMEKL
LPDVAALWGS IKAGKASMMA LDEAMF
|
|---|
| |