| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1959 |
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| Symbol | |
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| ID | 3963075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2102524 |
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| End bp | 2104314 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916778 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_523215 |
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| Protein GI | 89900744 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.693184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTACG TTGCCCCCCT CAAAGACATG CTTTTCAATC TCAAGTATCT CGCCGATATT
GAGCAGATCG CCCAGTTGCC AGGTTTTGAA GATGCTGGTT TTGAGACGGC GCAAGCCGTG
CTGGAGGAAG CTGCCAAGTT CAACGAGGGG GTGCTTGCGC CGCTGAACTG GGAGGGTGAC
AAGAACCCTT CCAGCTGGAA AGATGGCGTG GTGACGGCAA CACCCGGTTT CAAGCAAGCG
TTTCGCCAGT TTGCTGACGG TGGTTGGCAG GGCTTGCAAC ACCCGGTCGA TTTTGGTGGA
CAGGGGCTGC CCAAGACCAT CGGCGCGGCC TGCGGCGAAA TGCAAAACTC AGCCAACATG
AGTTTTGCCC TGTGCCCGCT GCTGACTGAC GGCGCGATTG AAGCGCTGCT GACGGCCGGT
TCCAACGAAC TGAAAGCTAC CTACCTTGAA AACCTGGTCA GCGGCAAGTG GACCGGCACC
ATGAACCTGA CCGAGCCACA GGCTGGCAGC GATCTGGCCG CCGTGCGTTC GCGCGCTGAG
CCGCTGGCAG ACGGCAGTTA CAAGGTGTTT GGCACCAAGG TTTTCATCAC CTGGGGTGAG
CACGATATGG CCGAAAACAT CGTCCATCTG GTGCTTGCCC GCGTCACTGG CGCACCGGAA
GGCGTCAAGG GCATCAGCCT GTTCGTCGTG CCCAAATTCT TGGTGAACAA AGACGGCTCG
CTGGGTGCAC GCAACGATGT GCAATGCGTC AGCATCGAGC ACAAGATGGG CATCAAGGCC
AGTCCGACAG CCGTGCTGCA ATTTGGTGAC CATGGGGGTG CTTTGGGTTA CCTGGTGGGT
CAGGAGAACC GCGGCCTGGA ATACATGTTC ATCATGATGA ACGCTGCCCG CTTTGGCGTC
GGCGTGCAGG GCATCGCGAT TGCCGAGCGC TCTTATCAAC AAGCGGTGAC CTTTGCCAAA
GACCGGGTTC AAAGCCGTCC GGTCGATGCT CTGGCACCTG CCAACGCGAC CATCATCTAT
CACCCCGATG TGAAGCGCAT GCTGATGACG ATGCGTGCCT ACACCGAGGG CTGCCGCGCC
ATGGCGACGG TGGCAGCTGC GGCCTATGAC GCGGCGCATC ATCACGCAGA CGCCGAGGTG
CGCAAACAGA ACCAGGCGTT CTATGAGTTC ATGGTGCCGC TGATCAAGGG TTACAGCACC
GAGATGAGCC TGGAGGTCAC CTCGCTCGGC GTGCAGGTGC ATGGCGGCAT GGGTTATATC
GAAGAAACCG GTGCAGCGCA GTACTACCGT GATGCCAAGA TCCTGACCAT CTACGAAGGC
ACCACCGCCA TTCAGGCCAA TGACCTGGTC GGGCGCAAGA CCGCGCGTGA TGGCGGCCAA
ACCGCCAAGG CGCTGGCCGC GCAGATTGAA GCGACGGAAG GCTTGCTGGT CAAGAGTGGC
AGTGCCGATG CGCTGGCGGT CGCCAAACGT CTCAAGGCGG CGCGTGTGGC CTTTGTCGAC
GTGGTGAACT TTGTGGCGAC CAACACCAAG ACCCGGCCCA GTGATGTGTT TGCCGGCAGC
GTGCCCTATC TGATGCTGGC CGGTAACCTG ATGGCGGGCT GGCAGTTGGC GCGCGCGCTG
CTGATGGCGC AGGACGAGAT CGCCCAAGGG GTGGATGTGT CCTTCATGCA AGCCAAGATC
ATCACGGCGC GCTTCTATGC CGACCATTTG CTGACCAAGG CCCCTGGCAT GCGCGACGCC
ATTGTGGACG GCTGCGAGAG CGTCACGGCG CTGGCCTTGG ATGCGTTCTG A
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| Protein sequence | MSYVAPLKDM LFNLKYLADI EQIAQLPGFE DAGFETAQAV LEEAAKFNEG VLAPLNWEGD
KNPSSWKDGV VTATPGFKQA FRQFADGGWQ GLQHPVDFGG QGLPKTIGAA CGEMQNSANM
SFALCPLLTD GAIEALLTAG SNELKATYLE NLVSGKWTGT MNLTEPQAGS DLAAVRSRAE
PLADGSYKVF GTKVFITWGE HDMAENIVHL VLARVTGAPE GVKGISLFVV PKFLVNKDGS
LGARNDVQCV SIEHKMGIKA SPTAVLQFGD HGGALGYLVG QENRGLEYMF IMMNAARFGV
GVQGIAIAER SYQQAVTFAK DRVQSRPVDA LAPANATIIY HPDVKRMLMT MRAYTEGCRA
MATVAAAAYD AAHHHADAEV RKQNQAFYEF MVPLIKGYST EMSLEVTSLG VQVHGGMGYI
EETGAAQYYR DAKILTIYEG TTAIQANDLV GRKTARDGGQ TAKALAAQIE ATEGLLVKSG
SADALAVAKR LKAARVAFVD VVNFVATNTK TRPSDVFAGS VPYLMLAGNL MAGWQLARAL
LMAQDEIAQG VDVSFMQAKI ITARFYADHL LTKAPGMRDA IVDGCESVTA LALDAF
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