Gene Patl_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0656 
Symbol 
ID4173010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp758487 
End bp760247 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content48% 
IMG OID638053659 
Productacyl-CoA dehydrogenase-like 
Protein accessionYP_660239 
Protein GI109896984 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT ACACACACCC TTTAGCAGAT GCTGAGTTTG TACTGAATGA ACTGGTTGAC 
TTCGATGGGC TATGCGCTGA TATGGGTCAA GAGGACATCA ATGGCGAGTT GGCAAGCGTT
ATATTGGCTG AAGCCGGCAA ACTAGGTAGC GGCGTATTAG CACCATTGAA CAAGGTCGGT
GATTTACAAC ATCCGAGTAT GATTGATAAG GACGGCGGAC CAGGTGTGCA AGAAACAGCC
GGGTTTGCAA AAGCCTATCA AGAATACGTG GAGGGTGGTT GGGCATCGTT AACCGGTGCT
GAGGAATTCG GCGGTCAGAA CCTTCCGAAT GTACTTGGTA GTGCTGTTAA TGAGGTGTGG
CATACGTCCA ATATGGCGTT CGCTCTATGT CCATTGTTAA GCCAAGGCGC GATTGAGTCG
ATTTCTCATC ACGGCAGTGA GCATTTACAG CAGTCTTATT TGCCTAAAAT GTTAAGCGGT
GAATGGCCAG GTACCATGAA CCTTACTGAG CCTGATGCTG GTACTGATTT GGCTGCGGTG
AAAACCAAGG CGGTGCCAAA TGATGATCAT TACTTGATTA CCGGCCAAAA AATTTATATC
ACTTGGGGCG ATCATCAAAT GACCGATAAT ATCGTGCATT TAGTGTTAGC AAGACTGCCT
GATGCACCAG CCGGTGTAAA AGGTATTTCA CTGTTCATCG TGCCCAAATT TAATTTGGAT
GAAAATGGTG CCCCAGCTGA GCGCAACGAT GCTTATTGTG TTTCGTTAGA GCACAAAATG
GGTATTCATG GCAGCCCAAC GTGTGTCATG AGCTTTGGTG ACAATGGTGG CGCGAAGGGC
TACTTAGTGG GCGAAGCTCA TAAAGGTCTG TCTTATATGT TCACCATGAT GAATCACGCC
CGTCAGGGTG TTGGTTTACA AGGTTTAGCC ATATCAGAAG CGTCATATCA GCATGCTTTG
GGGTACGCCA AAGAGCGTTT ACAAGGCACG AATAAAGACG GCAGCCGCTT CACCATTATG
AAGTTTCCTG ATGTGCGTCG TATGTTGATG CAAATGAAGT CATCTACAGA GGCCATGCGC
GCATTGTGCT TGGTGGCCGC AGCAGAAATT GACCGTGGCA ATGGGGCTCG CAGTGAGTTG
TTTACGCCAA TAGTCAAAGG CTGGTGTACT GAGTTGTCTC AAGAATTGAC CTACCTAGGT
ACGCAAATTC ATGGTGGTAT GGGCTTTATC GAAGAAACAG GCTCAGCGCA GTTCTATCGA
GATGCCAGAA TTTTAACTAT CTATGAAGGC ACTACAGGCG TACAAGCACT GGATTTAGTC
GGGCGTAAAA CCTTGGTTAA TAAAGGTGAG GCTTTAGGCG CGCTTTTAGA TGAAATAGCC
ACAGATTTAG CTCAGTTTGA TGCCATGGGT GGCCAATTCA CATTGGCAGC TCAGCAATGT
AAAACGGCGC TTGAGTGCGG TGTAGCAGCT CGCCAGTGGT TGCTTGATAT TGCAGCACAA
GACAAAAATG CACCAGGCAG CGCCAGTGTC AACTTTATGA TGTTGTTTGG TTATTTGTGT
GGCGGCTGGT TAATGGCGAA AAGTGCGATG CAAGCCAAAG CGAAATTAGA TGCAGGCGAG
GGGAACAGCG AGTTCTTAAA CGCTAAGTTG ATTTCTGCAC AGTTCTTCTG TGAGCACATG
GTGGTGCGCA CCCAAGCGTG TTTCGCATCG ATTCAGGCGG GCAGCGAAAG CATCATGGCG
TTGCCTGAGG ATGCATTTTA A
 
Protein sequence
MSEYTHPLAD AEFVLNELVD FDGLCADMGQ EDINGELASV ILAEAGKLGS GVLAPLNKVG 
DLQHPSMIDK DGGPGVQETA GFAKAYQEYV EGGWASLTGA EEFGGQNLPN VLGSAVNEVW
HTSNMAFALC PLLSQGAIES ISHHGSEHLQ QSYLPKMLSG EWPGTMNLTE PDAGTDLAAV
KTKAVPNDDH YLITGQKIYI TWGDHQMTDN IVHLVLARLP DAPAGVKGIS LFIVPKFNLD
ENGAPAERND AYCVSLEHKM GIHGSPTCVM SFGDNGGAKG YLVGEAHKGL SYMFTMMNHA
RQGVGLQGLA ISEASYQHAL GYAKERLQGT NKDGSRFTIM KFPDVRRMLM QMKSSTEAMR
ALCLVAAAEI DRGNGARSEL FTPIVKGWCT ELSQELTYLG TQIHGGMGFI EETGSAQFYR
DARILTIYEG TTGVQALDLV GRKTLVNKGE ALGALLDEIA TDLAQFDAMG GQFTLAAQQC
KTALECGVAA RQWLLDIAAQ DKNAPGSASV NFMMLFGYLC GGWLMAKSAM QAKAKLDAGE
GNSEFLNAKL ISAQFFCEHM VVRTQACFAS IQAGSESIMA LPEDAF