Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0656 |
Symbol | |
ID | 4173010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 758487 |
End bp | 760247 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638053659 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_660239 |
Protein GI | 109896984 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAT ACACACACCC TTTAGCAGAT GCTGAGTTTG TACTGAATGA ACTGGTTGAC TTCGATGGGC TATGCGCTGA TATGGGTCAA GAGGACATCA ATGGCGAGTT GGCAAGCGTT ATATTGGCTG AAGCCGGCAA ACTAGGTAGC GGCGTATTAG CACCATTGAA CAAGGTCGGT GATTTACAAC ATCCGAGTAT GATTGATAAG GACGGCGGAC CAGGTGTGCA AGAAACAGCC GGGTTTGCAA AAGCCTATCA AGAATACGTG GAGGGTGGTT GGGCATCGTT AACCGGTGCT GAGGAATTCG GCGGTCAGAA CCTTCCGAAT GTACTTGGTA GTGCTGTTAA TGAGGTGTGG CATACGTCCA ATATGGCGTT CGCTCTATGT CCATTGTTAA GCCAAGGCGC GATTGAGTCG ATTTCTCATC ACGGCAGTGA GCATTTACAG CAGTCTTATT TGCCTAAAAT GTTAAGCGGT GAATGGCCAG GTACCATGAA CCTTACTGAG CCTGATGCTG GTACTGATTT GGCTGCGGTG AAAACCAAGG CGGTGCCAAA TGATGATCAT TACTTGATTA CCGGCCAAAA AATTTATATC ACTTGGGGCG ATCATCAAAT GACCGATAAT ATCGTGCATT TAGTGTTAGC AAGACTGCCT GATGCACCAG CCGGTGTAAA AGGTATTTCA CTGTTCATCG TGCCCAAATT TAATTTGGAT GAAAATGGTG CCCCAGCTGA GCGCAACGAT GCTTATTGTG TTTCGTTAGA GCACAAAATG GGTATTCATG GCAGCCCAAC GTGTGTCATG AGCTTTGGTG ACAATGGTGG CGCGAAGGGC TACTTAGTGG GCGAAGCTCA TAAAGGTCTG TCTTATATGT TCACCATGAT GAATCACGCC CGTCAGGGTG TTGGTTTACA AGGTTTAGCC ATATCAGAAG CGTCATATCA GCATGCTTTG GGGTACGCCA AAGAGCGTTT ACAAGGCACG AATAAAGACG GCAGCCGCTT CACCATTATG AAGTTTCCTG ATGTGCGTCG TATGTTGATG CAAATGAAGT CATCTACAGA GGCCATGCGC GCATTGTGCT TGGTGGCCGC AGCAGAAATT GACCGTGGCA ATGGGGCTCG CAGTGAGTTG TTTACGCCAA TAGTCAAAGG CTGGTGTACT GAGTTGTCTC AAGAATTGAC CTACCTAGGT ACGCAAATTC ATGGTGGTAT GGGCTTTATC GAAGAAACAG GCTCAGCGCA GTTCTATCGA GATGCCAGAA TTTTAACTAT CTATGAAGGC ACTACAGGCG TACAAGCACT GGATTTAGTC GGGCGTAAAA CCTTGGTTAA TAAAGGTGAG GCTTTAGGCG CGCTTTTAGA TGAAATAGCC ACAGATTTAG CTCAGTTTGA TGCCATGGGT GGCCAATTCA CATTGGCAGC TCAGCAATGT AAAACGGCGC TTGAGTGCGG TGTAGCAGCT CGCCAGTGGT TGCTTGATAT TGCAGCACAA GACAAAAATG CACCAGGCAG CGCCAGTGTC AACTTTATGA TGTTGTTTGG TTATTTGTGT GGCGGCTGGT TAATGGCGAA AAGTGCGATG CAAGCCAAAG CGAAATTAGA TGCAGGCGAG GGGAACAGCG AGTTCTTAAA CGCTAAGTTG ATTTCTGCAC AGTTCTTCTG TGAGCACATG GTGGTGCGCA CCCAAGCGTG TTTCGCATCG ATTCAGGCGG GCAGCGAAAG CATCATGGCG TTGCCTGAGG ATGCATTTTA A
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Protein sequence | MSEYTHPLAD AEFVLNELVD FDGLCADMGQ EDINGELASV ILAEAGKLGS GVLAPLNKVG DLQHPSMIDK DGGPGVQETA GFAKAYQEYV EGGWASLTGA EEFGGQNLPN VLGSAVNEVW HTSNMAFALC PLLSQGAIES ISHHGSEHLQ QSYLPKMLSG EWPGTMNLTE PDAGTDLAAV KTKAVPNDDH YLITGQKIYI TWGDHQMTDN IVHLVLARLP DAPAGVKGIS LFIVPKFNLD ENGAPAERND AYCVSLEHKM GIHGSPTCVM SFGDNGGAKG YLVGEAHKGL SYMFTMMNHA RQGVGLQGLA ISEASYQHAL GYAKERLQGT NKDGSRFTIM KFPDVRRMLM QMKSSTEAMR ALCLVAAAEI DRGNGARSEL FTPIVKGWCT ELSQELTYLG TQIHGGMGFI EETGSAQFYR DARILTIYEG TTGVQALDLV GRKTLVNKGE ALGALLDEIA TDLAQFDAMG GQFTLAAQQC KTALECGVAA RQWLLDIAAQ DKNAPGSASV NFMMLFGYLC GGWLMAKSAM QAKAKLDAGE GNSEFLNAKL ISAQFFCEHM VVRTQACFAS IQAGSESIMA LPEDAF
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