More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_0866 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  70.78 
 
 
596 aa  842    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  93.94 
 
 
594 aa  1098    Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  64.84 
 
 
605 aa  775    Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  65 
 
 
600 aa  799    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  98.15 
 
 
594 aa  1195    Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  70.13 
 
 
596 aa  834    Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  68.62 
 
 
595 aa  783    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  70.81 
 
 
596 aa  831    Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  69.54 
 
 
596 aa  835    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  74.5 
 
 
596 aa  894    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  60.89 
 
 
593 aa  720    Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  54.19 
 
 
597 aa  645    Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  75.42 
 
 
594 aa  936    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  74.33 
 
 
596 aa  902    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  69.88 
 
 
600 aa  857    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  77.78 
 
 
594 aa  959    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  59.76 
 
 
598 aa  706    Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  74.66 
 
 
596 aa  920    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  100 
 
 
594 aa  1211    Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  74.66 
 
 
596 aa  920    Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  74.83 
 
 
596 aa  896    Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  75 
 
 
596 aa  899    Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  75.67 
 
 
596 aa  943    Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  70.13 
 
 
595 aa  818    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  75.34 
 
 
596 aa  923    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  74.66 
 
 
596 aa  904    Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  68.19 
 
 
596 aa  811    Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  70.77 
 
 
593 aa  819    Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  71.24 
 
 
596 aa  856    Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  74.83 
 
 
596 aa  896    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  71.24 
 
 
596 aa  855    Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  77.01 
 
 
596 aa  956    Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  76.77 
 
 
595 aa  951    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  74.66 
 
 
596 aa  894    Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  71.24 
 
 
596 aa  849    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  70.61 
 
 
597 aa  820    Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  74.83 
 
 
596 aa  897    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  76.26 
 
 
594 aa  923    Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  74.66 
 
 
596 aa  894    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  72.05 
 
 
593 aa  854    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  74.66 
 
 
596 aa  897    Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  70.81 
 
 
596 aa  831    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  70.9 
 
 
596 aa  845    Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  74.66 
 
 
596 aa  920    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2553  acyl-CoA dehydrogenase domain-containing protein  83.75 
 
 
367 aa  634  1e-180  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0929  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  83.75 
 
 
367 aa  634  1e-180  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  53.28 
 
 
598 aa  627  1e-178  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  54.77 
 
 
593 aa  597  1e-169  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  52.43 
 
 
595 aa  595  1e-168  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.25 
 
 
592 aa  585  1.0000000000000001e-165  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  50.25 
 
 
586 aa  582  1.0000000000000001e-165  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  50.09 
 
 
594 aa  568  1e-160  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  48.64 
 
 
592 aa  562  1.0000000000000001e-159  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  49.25 
 
 
594 aa  558  1e-158  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  48.72 
 
 
593 aa  560  1e-158  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  52.13 
 
 
593 aa  558  1e-157  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  48.63 
 
 
592 aa  555  1e-157  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  48.47 
 
 
594 aa  554  1e-156  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  50.25 
 
 
592 aa  544  1e-153  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  47.51 
 
 
615 aa  543  1e-153  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  50.94 
 
 
587 aa  538  9.999999999999999e-153  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  50.34 
 
 
579 aa  539  9.999999999999999e-153  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  50.85 
 
 
587 aa  539  9.999999999999999e-153  Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  47.84 
 
 
593 aa  538  9.999999999999999e-153  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  50.85 
 
 
587 aa  541  9.999999999999999e-153  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  48.72 
 
 
592 aa  532  1e-150  Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  47.55 
 
 
591 aa  531  1e-149  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  53.4 
 
 
589 aa  529  1e-149  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  46.82 
 
 
593 aa  530  1e-149  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  49.5 
 
 
614 aa  527  1e-148  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  48.57 
 
 
593 aa  527  1e-148  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  48.46 
 
 
572 aa  523  1e-147  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  47.32 
 
 
589 aa  521  1e-146  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  47.55 
 
 
592 aa  521  1e-146  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  46.72 
 
 
593 aa  519  1e-146  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  46.84 
 
 
586 aa  515  1.0000000000000001e-145  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  46.88 
 
 
592 aa  516  1.0000000000000001e-145  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  46.4 
 
 
592 aa  512  1e-144  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  51.77 
 
 
593 aa  514  1e-144  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0835  acyl-CoA dehydrogenase domain-containing protein  46.39 
 
 
585 aa  509  1e-143  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00122363 
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  47.63 
 
 
592 aa  507  9.999999999999999e-143  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  46.83 
 
 
592 aa  505  9.999999999999999e-143  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  46.06 
 
 
592 aa  508  9.999999999999999e-143  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  46.58 
 
 
600 aa  507  9.999999999999999e-143  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  46.73 
 
 
590 aa  506  9.999999999999999e-143  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  45.33 
 
 
594 aa  503  1e-141  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  45.9 
 
 
592 aa  503  1e-141  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  46.67 
 
 
592 aa  503  1e-141  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1770  acyl-CoA dehydrogenase-like protein  47.69 
 
 
580 aa  505  1e-141  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.270198 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  46 
 
 
593 aa  499  1e-140  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  47.4 
 
 
591 aa  499  1e-140  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_008228  Patl_1918  acyl-CoA dehydrogenase-like  45 
 
 
600 aa  501  1e-140  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.477774  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  44.91 
 
 
595 aa  496  1e-139  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  46.62 
 
 
596 aa  497  1e-139  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  45.79 
 
 
595 aa  496  1e-139  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  45.41 
 
 
595 aa  498  1e-139  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_007794  Saro_2105  acyl-CoA dehydrogenase-like  46.29 
 
 
600 aa  498  1e-139  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0867626  n/a   
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  44 
 
 
598 aa  496  1e-139  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  44.91 
 
 
595 aa  496  1e-139  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  44.91 
 
 
595 aa  496  1e-139  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
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