| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3819 |
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| Symbol | |
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| ID | 5106050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4207640 |
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| End bp | 4209412 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505074 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001189299 |
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| Protein GI | 146308834 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAT TCAACGCCCC GCTGCGCGAT ATGCGCTTCG TCCTCCATGA CGTCTTCCAG
GCGCCGAGCC TGTGGGCACG TCTGCCGGCC CTGGCCGAGA CCGTCGATGC CGACACCGCC
GATGCCATCC TCGAAGAGGC GGCCAAGGTC ACCGGCAGCC TGATCGCTCC GCTGAATCGC
AGCGGCGACG AGGAAGGCGC GCAGTGGGTC GATGGCGACG TGCGCACCCC GGCAGGTTTT
CGCGAGGCCT ACGCCACCTA CACCGAAGGC GGCTGGGTCG GCCTGTCCGG CAACCCGAAT
TACGGCGGCA TGGGCATGCC CAAGATGCTC GCCGTAGCCT TCGAGGAAAT GCTCTACGCC
GCCGGCTCCA GCTTCGCGCT GTACTCGGCG CTGAGCTCCG GCGCCTGCCT GGCCATCGAC
GCCCACGCCA GCGAAGACCT TAAAACCACC TACCTGCCAC CAATGTACGA AGGCCGCTGG
GCCGGCTCCA TGTGCCTGAC CGAGGCCCAT GCCGGCACCG ATCTGGGCAT CATCCGCACC
CGCGCCGAGC CGCAGGCCGA CGGCAGCTAC AAGGTCACCG GCAGCAAGAT CTTTATCACC
GGCGGTGAGC AGGACCTGAC CGAGAACATC ATCCATCTGG TGCTGGCCAA GTTGCCGGAC
GCACCGGCCG GGCCGAAGGG CATCTCGCTG TTTCTGGTGC CCAAGGTGAT GGTCAATGAC
GACGGCAGCC TCGGCGCGCG CAACGCCGTG AGCTGCGGCT CCATCGAGCA CAAGATGGGC
ATCAAGGCCT CGGCCACCTG CGTGATGAAC TTCGACGGCG CCACCGGCTA CCTGATCGGC
GAGGTCAACA AGGGCCTGGC GGCGATGTTC ACCATGATGA ACTACGAGCG CCTGTCCATC
GGCATCCAGG GCATCGGCTG CGCCGAGGCC TCCTACCAGT CGGCCGTCAG CTACGCCCGC
GAGCGTATCC AGAGCCGCGC CGCCACTGGC CCGGTCAACC ACGACAAGGT CGCCGACCCG
ATCATCGTGC ACGCTGACGT GCGTCGCATG CTGCTGACCA TGAAGGCGCT GAACGAAGGT
GGTCGCGCCT TTGCCTGCTA CGTCGGTCAG CAGCTCGACC TGGCCAAGTA CGCCGAGGAC
GCCAGCGAAC GGCAGAATGC CGAAGCCCTG GTGGCCCTGC TGACACCAGT GGCCAAGGCC
TTCTTCACCG ATACCGGGCT GGAAAGCTGC GTGCACGGCC AGCAGGTGTT CGGCGGCCAC
GGCTATATCC GCGAGTGGGG CCAGGAGCAG CTGGTGCGCG ACGTGCGCAT CGCGCAGATC
TACGAAGGCA CCAACGGCAT CCAGGCGCTC GACCTGCTGG GCCGCAAGGT GGTGGCCAAC
GGCGGCGCCG CGCTGCGCCT GTTCGCCGGC GAGGTGCGCG ACTTCGCCCA TGCCCATGAA
TCGCCTTACC GCGAGCGCCT GATCGAGGCC CTGGAGCGCC TGGAGGCGGT CAGCGGCTGG
CTGCTGGAGC AGGCCAAGAG CGACCCCAAC TCGGTGGGCG CCGCCTCGGT GGAGTACCTG
CACCTGTTCG GCTACGTCGC CTACGCCTAC ATGTGGGCGC GCATGGCGGC GGTGGCGCAG
GGCAAGCAGG GCGAAGACGA GGCCTTCTAT GGCGGCAAGC TGGCCACCGC CGAGTTCTTC
TTCGCCCGCC TGCTGCCGCG CACCCTGAGC CTGGAGGCGA GCATTCGTGC CGGCAGCCAG
CCGCTCTATG GTCTGGCTGC CGAGCAATTT TGA
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| Protein sequence | MPEFNAPLRD MRFVLHDVFQ APSLWARLPA LAETVDADTA DAILEEAAKV TGSLIAPLNR
SGDEEGAQWV DGDVRTPAGF REAYATYTEG GWVGLSGNPN YGGMGMPKML AVAFEEMLYA
AGSSFALYSA LSSGACLAID AHASEDLKTT YLPPMYEGRW AGSMCLTEAH AGTDLGIIRT
RAEPQADGSY KVTGSKIFIT GGEQDLTENI IHLVLAKLPD APAGPKGISL FLVPKVMVND
DGSLGARNAV SCGSIEHKMG IKASATCVMN FDGATGYLIG EVNKGLAAMF TMMNYERLSI
GIQGIGCAEA SYQSAVSYAR ERIQSRAATG PVNHDKVADP IIVHADVRRM LLTMKALNEG
GRAFACYVGQ QLDLAKYAED ASERQNAEAL VALLTPVAKA FFTDTGLESC VHGQQVFGGH
GYIREWGQEQ LVRDVRIAQI YEGTNGIQAL DLLGRKVVAN GGAALRLFAG EVRDFAHAHE
SPYRERLIEA LERLEAVSGW LLEQAKSDPN SVGAASVEYL HLFGYVAYAY MWARMAAVAQ
GKQGEDEAFY GGKLATAEFF FARLLPRTLS LEASIRAGSQ PLYGLAAEQF
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