| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1918 |
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| Symbol | |
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| ID | 4172764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2323244 |
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| End bp | 2325046 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054926 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_661490 |
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| Protein GI | 109898235 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.477774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGTT ATAAAGCGCC GCAGAAAGAT GCGTTGTTCG TCATGAATGA ACTACTTGGC
TTTGAAAAGC ACTATGCAGA TCTTGGCTTT GAAGATGCAT CACCCGATAT GGTTGAAGCG
ATTTTCTCTG AAGCTGCGAA GTTTAGCGAA AACGTATTGG CTCCGCTTAA TGCGGTAGGT
GATGACGAAG GCTGTACCTG GGAAAACTCA GTGGTGACCA CGCCTACAGG TTTTAAAGAA
GCTTACCAGC AATATGTTGA GGGCGGTTGG CCGTCAATGA CACATCCTGC TGAATTTGGT
GGTCAAGAAT TACCGTATTC ACTTTCATCT GCGTTAGGCG AGTGGCTCTC TGGTGCAAAC
CATTCATGGG CCATGTACCC AGGTTTAAGC CAAGGTTGTA TGGCGACACT TGAAGCACAC
GGTACGCCAG AGCAACAGAA GATGTTTTTG CACAAATTAG TCGCAGGTAC ATGGACCGGC
ACTATGTGTT TGACCGAACC TCATTGTGGC TCTGACCTTG GTATGCTTAA AACGAAGGCC
GTCAAAAACG ATGATGGTAG CTACAACTTA ACCGGCACTA AGATTTTTAT CTCAGCCGGT
GAGCACGATA TGTCTGAAAA TATTGTGCAT ATTGTTATCG CACGCTTACC TGATGCGCCT
GAAGGCACGA AAGGGATTTC TTTGTTCGTT GTACCTAAAT TCAATGTGAG CCCAGACGGT
GAAAACGTAG ATCGTAACGC CGTTACGTGT GGTTCAATTG AGCATAAAAT GGGTATCAAA
GGTTCTGCCA CCTGCGTGAT TAACTTTGAT GGCGCAAAAG GCTATTTAGT GGGCACAGAA
AACCGCGGTT TGAACTGCAT GTTTACCTTC ATGAACTCGG CACGTATCGG CACCGGCCTT
GAAGGTTTGG CATCAAGCGA AACGGCGTTT CAAGGTGCTT TAGCTTATGC AAAAGACCGT
TTACAGTTTC GTTCAATGAA AGGGGTGCAG AACCCAGATG GGCCTGCAGA TCCAATCATA
GTGCACCCTG ATGTGCGCCG TATGTTATTA ACCCAAAAAG CCTTTGCTGA AGGCAACCGT
GCACTGGCGA TTTATGCCAT GAAGTTGGTT GATATTACCC TATACAGTAA AGATGAAGCC
GCTAAACAAG TAAGCGAAGC TAAACTCGCT TTCTTAACGC CTATTGTGAA AGCCTTCTTA
ACTGAAACGG CACAAGAATC AACTAGTTAC GGTATGCAAG TTTTCGGTGG ACACGGTTTC
ATCAAAGAGT GGGGCATGGA GCAGTTGGCC CGTGATACGC GTATTTGTAC TATGTATGAA
GGCACGACGG GTATTCAAGC GATCGATTTG CTGGCGCGTA AAGTGGTTGG CTCAAACGGT
AAATTGCTTG AAGTGTTCAC TCAAGAAGTA CGTGATTTCT GTGTCAGCAT TCGTGACAAA
GGTCAATTCA ACGCATGGTC AAATGCAATT GAAGTACACC TTGATGAGTG GAAGCAAATC
ACGGTCGATA TTACTAAACG TGCAGCACAA AACCCTGATG AACTAGGCGC TGCTTCAGTT
GATTACCTAA TGTACTCTGG TTACGTGACG GTAGGTTATT TCTGGTTGAA AATGGCCGTA
TTAGCCCAAG AAAAACTTGA TGCAGGTGCA GATAACGCTG ATTTTTACCA AGCGAAGTTA
CATACGGCTA AGTTTTACTT CGACCGTTTG TTAACCCGTA CGCGCTCGCT TGTGTCAGCA
ATCGAAACCG GATCTGACAG CTTAATGAGC ATGCCAGTTG ATCAATTCGA TCTAGGTGCA
TAA
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| Protein sequence | MEGYKAPQKD ALFVMNELLG FEKHYADLGF EDASPDMVEA IFSEAAKFSE NVLAPLNAVG
DDEGCTWENS VVTTPTGFKE AYQQYVEGGW PSMTHPAEFG GQELPYSLSS ALGEWLSGAN
HSWAMYPGLS QGCMATLEAH GTPEQQKMFL HKLVAGTWTG TMCLTEPHCG SDLGMLKTKA
VKNDDGSYNL TGTKIFISAG EHDMSENIVH IVIARLPDAP EGTKGISLFV VPKFNVSPDG
ENVDRNAVTC GSIEHKMGIK GSATCVINFD GAKGYLVGTE NRGLNCMFTF MNSARIGTGL
EGLASSETAF QGALAYAKDR LQFRSMKGVQ NPDGPADPII VHPDVRRMLL TQKAFAEGNR
ALAIYAMKLV DITLYSKDEA AKQVSEAKLA FLTPIVKAFL TETAQESTSY GMQVFGGHGF
IKEWGMEQLA RDTRICTMYE GTTGIQAIDL LARKVVGSNG KLLEVFTQEV RDFCVSIRDK
GQFNAWSNAI EVHLDEWKQI TVDITKRAAQ NPDELGAASV DYLMYSGYVT VGYFWLKMAV
LAQEKLDAGA DNADFYQAKL HTAKFYFDRL LTRTRSLVSA IETGSDSLMS MPVDQFDLGA
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