| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_4298 |
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| Symbol | |
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| ID | 4024822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 4760743 |
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| End bp | 4762524 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964507 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_571416 |
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| Protein GI | 91978757 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.10513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATC GCGCTCCGAT CGAAGATATC CTGCTCTCCC TCAATCACGG CGCCGGCCTG
CAGGCTGCCG TGGCGGCCGG GCATCTGGGC GACTATGACA GCGAGATCAC CGCTCAGGTG
CTCGAAGAGG CCGGCAAGTT CGCCAGCGAT ATTCTGGCGC CGCTGAACCG GATCGGCGAC
AAGCACGGCA TCAAGCTCGA GCACAACAAG GTCACCACCG CGCCGGGCTG GCCGGACGCC
TATCAGCGCT GGATCGCGGC GGGCTGGAAC GCCGTGTCGG GACCGGAGCA ATTCGGCGGC
CAGGGTCTGC CGAGCGCGGT CAACGCGGTG TGCACCGAAA TCTGGGCGTC GTCGAACATG
GCGTTCGGGC TGTGCCCGCT GCTGACGCTC TCGGCCATCG ACGCGCTGCA TGCGCACGGC
AGCGACGCGC TGAAGAACAT CTATCTCGGC AAGCTGGTGT CCGGCGAATG GACCGGCACG
ATGCAACTGA CCGAGCCGCA GGCCGGCTCC GACGTCGGCG CGCTGCGGAC CCGCGCCGAG
CGCGCGGCCG ACGGCAGCTA CAAGATCTTC GGCAGCAAGA TCTTCATTAC TTACGGCGAC
CACGACATGA CCGACAACAT CGTGCATTTC GTGCTCGCGC GATTGCCCGA TGCGCCCGCG
GGCACCAAGG GCATCTCGCT GTTTCTGATT CCGAAATTCC TGGTGAACGC CGACGGCTCG
CTGGGCGCGC GCAACGACAT CTTCCCGAGC GGCGTCGAGC ACAAGCTCGG CATCCACGCC
TCGCCGACCT GCACGATGAC AATGGGCGAT CACGGCGGCG CGATCGGCTA TCTGATCGGC
GAGGAAAATC GCGGCATGCA GTGCATGTTC ACGATGATGA ATCAGGCCCG TCTCGGCGTC
GCTCTCGAAG GCGTCGGCAT CGCCGATCGC GCCTATCAGC AGGCTCTGGC CTACGCGCAG
GAGCGCAAGC AGGGCCGCGC CATCGGCAGC ACCAGCACGG GCTCCGATCC GATCATCAAG
CATCCCGACG TCAAGCGGAC GCTGCTGCTG ATGCGCGCGC TGACCGGCGC GGCGCGGACG
ATCTGCTATT CGACGGCGGT CGCGCTCGAT GTCGCCGCGC GCAGCGACGA TCCGAAGATC
AAGGCCGACG CCGCCGCGCG CGCCGCGCTG CTGACGCCGA TCGCGAAGGC GTTCTCCACC
GACATCGGCA CCGAGGTCGC CTCGTTCGGC GTGCAGATCC ACGGCGGCAT GGGCTTCATC
GAGGAAACCG GCGCAGCGCA GCATTATCGC GACGCCCGCA TCGCGCCGAT CTACGAAGGA
ACCAACGGCA TCCAGTCGAT CGACCTCGTC ACCCGCAAGC TCGGCGTCAA TGGCGGCGCG
TCGGTGTGGG CGCTGCTCGA CGAATTGTCG GTGATCGTCA AGAACGTCGA AGCCAGCAAC
GATCCGGCGT TCGGCGCGAC CGGGCCGCGG CTGCGCGATG CGCTCGATGC GCTGACGCGC
GCCAGCAAGT ACTTGCTGGA GAAACTCGGC TCCTCGACCA ATGAGGCGCT GGCGGGCGCG
ACGCCGTATC TGCGGCTGTT CGGATCGACG CTCGGCGGCT GTGCGCTGGC GGCGGAAGCC
TTGGCGGCGC GCGATCTCGA CAATGTCGGC GATCCGGCGC GCTATGTGAC GCTGGCGCGA
TTCTTCGCCG AGAACGTCGC GGTGCAGGCG GGAGCGCTCG AGCGCAGCGT GGTCGACAGC
GCCGGGGCGC TGGCCTCCGC CGATGCGGTG CTGACCGCCT GA
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| Protein sequence | MTYRAPIEDI LLSLNHGAGL QAAVAAGHLG DYDSEITAQV LEEAGKFASD ILAPLNRIGD
KHGIKLEHNK VTTAPGWPDA YQRWIAAGWN AVSGPEQFGG QGLPSAVNAV CTEIWASSNM
AFGLCPLLTL SAIDALHAHG SDALKNIYLG KLVSGEWTGT MQLTEPQAGS DVGALRTRAE
RAADGSYKIF GSKIFITYGD HDMTDNIVHF VLARLPDAPA GTKGISLFLI PKFLVNADGS
LGARNDIFPS GVEHKLGIHA SPTCTMTMGD HGGAIGYLIG EENRGMQCMF TMMNQARLGV
ALEGVGIADR AYQQALAYAQ ERKQGRAIGS TSTGSDPIIK HPDVKRTLLL MRALTGAART
ICYSTAVALD VAARSDDPKI KADAAARAAL LTPIAKAFST DIGTEVASFG VQIHGGMGFI
EETGAAQHYR DARIAPIYEG TNGIQSIDLV TRKLGVNGGA SVWALLDELS VIVKNVEASN
DPAFGATGPR LRDALDALTR ASKYLLEKLG SSTNEALAGA TPYLRLFGST LGGCALAAEA
LAARDLDNVG DPARYVTLAR FFAENVAVQA GALERSVVDS AGALASADAV LTA
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