More than 300 homologs were found in PanDaTox collection
for query gene RPD_4298 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_4104  acyl-CoA dehydrogenase domain-containing protein  57.95 
 
 
587 aa  650    Methylobacterium extorquens PA1  Bacteria  normal  0.307974  normal  0.918519 
 
 
-
 
NC_004310  BR0412  acyl-CoA dehydrogenase family protein  55.91 
 
 
592 aa  639    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2498  putative acyl-CoA dehydrogenase  78.75 
 
 
592 aa  970    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.242453  normal 
 
 
-
 
NC_012850  Rleg_0600  acyl-CoA dehydrogenase domain protein  56.47 
 
 
592 aa  654    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.198315  normal  0.545075 
 
 
-
 
NC_011369  Rleg2_0555  acyl-CoA dehydrogenase domain protein  56.47 
 
 
592 aa  655    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.539594 
 
 
-
 
NC_009719  Plav_0775  acyl-CoA dehydrogenase domain-containing protein  57.02 
 
 
586 aa  650    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.66382  normal 
 
 
-
 
NC_007406  Nwi_0637  acyl-CoA dehydrogenase  78.45 
 
 
592 aa  947    Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.337916  normal 
 
 
-
 
NC_011757  Mchl_4472  acyl-CoA dehydrogenase domain protein  57.78 
 
 
587 aa  649    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.71418  normal 
 
 
-
 
NC_010511  M446_2370  acyl-CoA dehydrogenase domain-containing protein  57.6 
 
 
592 aa  664    Methylobacterium sp. 4-46  Bacteria  normal  0.734767  normal 
 
 
-
 
NC_011004  Rpal_1028  acyl-CoA dehydrogenase domain protein  89.21 
 
 
593 aa  1077    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4454  Acyl-CoA dehydrogenase-like  92.19 
 
 
593 aa  1057    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.456849  normal 
 
 
-
 
NC_009505  BOV_0420  acyl-CoA dehydrogenase family protein  55.74 
 
 
592 aa  636    Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1156  acyl-CoA dehydrogenase-like  81.28 
 
 
615 aa  986    Rhodopseudomonas palustris BisB18  Bacteria  normal  0.291998  normal 
 
 
-
 
NC_007958  RPD_4298  acyl-CoA dehydrogenase-like  100 
 
 
593 aa  1204    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.10513 
 
 
-
 
NC_007964  Nham_0782  acyl-CoA dehydrogenase-like  81.25 
 
 
594 aa  977    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3266  acyl-CoA dehydrogenase domain-containing protein  58.05 
 
 
596 aa  659    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2841  acyl-CoA dehydrogenase domain protein  58.96 
 
 
592 aa  668    Methylobacterium nodulans ORS 2060  Bacteria  normal  0.404549  n/a   
 
 
-
 
NC_011989  Avi_0986  acyl-CoA dehydrogenase  56.11 
 
 
591 aa  653    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0487  acyl-CoA dehydrogenase domain-containing protein  54.87 
 
 
593 aa  634  1e-180  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0528  acyl-CoA dehydrogenase domain-containing protein  56.31 
 
 
592 aa  630  1e-179  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71797  n/a   
 
 
-
 
NC_010725  Mpop_4586  acyl-CoA dehydrogenase domain protein  57.78 
 
 
587 aa  631  1e-179  Methylobacterium populi BJ001  Bacteria  normal  0.0241066  normal 
 
 
-
 
NC_008254  Meso_0723  acyl-CoA dehydrogenase-like  54.31 
 
 
591 aa  626  1e-178  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3829  acyl-CoA dehydrogenase domain-containing protein  56.51 
 
 
579 aa  624  1e-177  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.867715 
 
 
-
 
NC_007298  Daro_1555  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.62 
 
 
597 aa  572  1.0000000000000001e-162  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.000406482  normal  0.0195693 
 
 
-
 
NC_009074  BURPS668_2865  acyl-CoA dehydrogenase domain-containing protein  49.23 
 
 
596 aa  570  1e-161  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2975  Acyl-CoA dehydrogenase  49.23 
 
 
596 aa  570  1e-161  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3168  acyl-CoA dehydrogenase domain-containing protein  49.74 
 
 
598 aa  568  1e-161  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.712846  normal 
 
 
-
 
NC_009076  BURPS1106A_2926  acyl-CoA dehydrogenase domain-containing protein  49.23 
 
 
596 aa  570  1e-161  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0835  acyl-CoA dehydrogenase domain-containing protein  52.71 
 
 
585 aa  568  1e-160  Maricaulis maris MCS10  Bacteria  normal  hitchhiker  0.00122363 
 
 
-
 
NC_007347  Reut_A2548  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.66 
 
 
594 aa  562  1.0000000000000001e-159  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6368  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.49 
 
 
594 aa  560  1e-158  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1655  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
596 aa  560  1e-158  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2265  acyl-CoA dehydrogenase domain protein  48.22 
 
 
598 aa  556  1e-157  Thauera sp. MZ1T  Bacteria  normal  0.086163  n/a   
 
 
-
 
NC_007298  Daro_1215  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.07 
 
 
593 aa  557  1e-157  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.967786 
 
 
-
 
NC_007347  Reut_A2140  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.08 
 
 
600 aa  552  1e-156  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2170  acyl-CoA dehydrogenase domain-containing protein  48.22 
 
 
597 aa  555  1e-156  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0235867  normal 
 
 
-
 
NC_007951  Bxe_A1000  putative acyl-CoA dehydrogenase  47.69 
 
 
596 aa  549  1e-155  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.881072 
 
 
-
 
NC_007952  Bxe_B0379  putative acyl-CoA dehydrogenase  47.86 
 
 
595 aa  548  1e-155  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0764  acyl-CoA dehydrogenase domain-containing protein  50.51 
 
 
596 aa  550  1e-155  Burkholderia phymatum STM815  Bacteria  normal  normal  0.618191 
 
 
-
 
NC_010681  Bphyt_2983  acyl-CoA dehydrogenase domain protein  48.46 
 
 
596 aa  550  1e-155  Burkholderia phytofirmans PsJN  Bacteria  normal  0.143309  hitchhiker  0.00237955 
 
 
-
 
NC_007509  Bcep18194_C6872  Acyl-CoA dehydrogenase  48.38 
 
 
596 aa  548  1e-154  Burkholderia sp. 383  Bacteria  normal  0.388534  normal 
 
 
-
 
NC_007510  Bcep18194_A4177  Acyl-CoA dehydrogenase  48.38 
 
 
596 aa  546  1e-154  Burkholderia sp. 383  Bacteria  normal  0.0909918  normal  0.449875 
 
 
-
 
NC_010623  Bphy_3934  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
596 aa  545  1e-154  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0739  acyl-CoA dehydrogenase-like protein  48.31 
 
 
594 aa  546  1e-154  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00752028  normal 
 
 
-
 
NC_010338  Caul_4489  acyl-CoA dehydrogenase domain-containing protein  52.64 
 
 
581 aa  544  1e-153  Caulobacter sp. K31  Bacteria  normal  normal  0.376796 
 
 
-
 
NC_010531  Pnec_1288  acyl-CoA dehydrogenase domain protein  49.49 
 
 
595 aa  543  1e-153  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.197154 
 
 
-
 
NC_012791  Vapar_3372  acyl-CoA dehydrogenase domain protein  47.44 
 
 
596 aa  542  1e-153  Variovorax paradoxus S110  Bacteria  normal  0.272289  n/a   
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  46.09 
 
 
596 aa  543  1e-153  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_010557  BamMC406_5533  acyl-CoA dehydrogenase domain-containing protein  48.55 
 
 
596 aa  539  9.999999999999999e-153  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6766  acyl-CoA dehydrogenase domain-containing protein  48.55 
 
 
596 aa  541  9.999999999999999e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5363  acyl-CoA dehydrogenase domain-containing protein  48.88 
 
 
596 aa  540  9.999999999999999e-153  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.984854  normal  0.255637 
 
 
-
 
NC_008544  Bcen2424_6274  acyl-CoA dehydrogenase domain-containing protein  48.55 
 
 
596 aa  540  9.999999999999999e-153  Burkholderia cenocepacia HI2424  Bacteria  normal  0.862607  normal  0.764481 
 
 
-
 
NC_008060  Bcen_1555  acyl-CoA dehydrogenase-like  48.55 
 
 
596 aa  540  9.999999999999999e-153  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.341728  n/a   
 
 
-
 
NC_010623  Bphy_3938  acyl-CoA dehydrogenase domain-containing protein  48.22 
 
 
600 aa  540  9.999999999999999e-153  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_5773  acyl-CoA dehydrogenase domain-containing protein  48.21 
 
 
596 aa  535  1e-151  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.64556 
 
 
-
 
NC_007948  Bpro_3141  acyl-CoA dehydrogenase-like  46.32 
 
 
596 aa  535  1e-151  Polaromonas sp. JS666  Bacteria  normal  0.0936679  normal  0.0128827 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  46.45 
 
 
596 aa  532  1e-150  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_009379  Pnuc_0514  acyl-CoA dehydrogenase domain-containing protein  49.57 
 
 
595 aa  532  1e-150  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4282  acyl-CoA dehydrogenase domain protein  46.84 
 
 
596 aa  532  1e-150  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_17380  Acyl-CoA dehydrogenase  48.82 
 
 
594 aa  534  1e-150  Azotobacter vinelandii DJ  Bacteria  decreased coverage  0.00730937  n/a   
 
 
-
 
NC_008825  Mpe_A1298  putative acyl-CoA dehydrogenase oxidoreductase protein  46.11 
 
 
596 aa  525  1e-148  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0939697 
 
 
-
 
NC_003295  RSc0925  putative acyl-CoA dehydrogenase oxidoreductase protein  47.14 
 
 
594 aa  523  1e-147  Ralstonia solanacearum GMI1000  Bacteria  normal  0.349332  normal 
 
 
-
 
NC_008781  Pnap_3285  acyl-CoA dehydrogenase domain-containing protein  47.68 
 
 
593 aa  523  1e-147  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  46.7 
 
 
596 aa  524  1e-147  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_011662  Tmz1t_2488  acyl-CoA dehydrogenase domain protein  48.65 
 
 
595 aa  524  1e-147  Thauera sp. MZ1T  Bacteria  normal  0.187957  n/a   
 
 
-
 
NC_012856  Rpic12D_0866  acyl-CoA dehydrogenase domain protein  46.3 
 
 
594 aa  519  1e-146  Ralstonia pickettii 12D  Bacteria  normal  0.732712  normal  0.534175 
 
 
-
 
NC_010682  Rpic_0795  acyl-CoA dehydrogenase domain protein  46.13 
 
 
594 aa  519  1e-146  Ralstonia pickettii 12J  Bacteria  normal  0.563115  normal  0.792914 
 
 
-
 
NC_007908  Rfer_1959  acyl-CoA dehydrogenase-like  46.4 
 
 
596 aa  516  1.0000000000000001e-145  Rhodoferax ferrireducens T118  Bacteria  normal  0.693184  n/a   
 
 
-
 
NC_007908  Rfer_2268  acyl-CoA dehydrogenase-like  46.64 
 
 
593 aa  517  1.0000000000000001e-145  Rhodoferax ferrireducens T118  Bacteria  normal  0.411151  n/a   
 
 
-
 
NC_008782  Ajs_2808  acyl-CoA dehydrogenase domain-containing protein  45.76 
 
 
596 aa  518  1.0000000000000001e-145  Acidovorax sp. JS42  Bacteria  normal  0.612856  normal  0.525867 
 
 
-
 
NC_011992  Dtpsy_2297  acyl-CoA dehydrogenase domain protein  45.76 
 
 
596 aa  518  1.0000000000000001e-145  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2644  acyl-CoA dehydrogenase-like protein  51.58 
 
 
593 aa  514  1e-144  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3353  acyl-CoA dehydrogenase domain-containing protein  47.02 
 
 
594 aa  509  1e-143  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0435  Acyl-CoA dehydrogenase  53.31 
 
 
589 aa  506  9.999999999999999e-143  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3596  acyl-CoA dehydrogenase domain-containing protein  48.8 
 
 
593 aa  508  9.999999999999999e-143  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.595481 
 
 
-
 
NC_008786  Veis_2091  acyl-CoA dehydrogenase domain-containing protein  44.54 
 
 
605 aa  502  1e-141  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.220712  normal  0.559542 
 
 
-
 
NC_012560  Avin_16400  Acyl-CoA dehydrogenase  47.46 
 
 
614 aa  499  1e-140  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2638  acyl-CoA dehydrogenase domain protein  49.62 
 
 
593 aa  501  1e-140  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.91 
 
 
592 aa  498  1e-139  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_009511  Swit_1469  acyl-CoA dehydrogenase domain-containing protein  46.93 
 
 
571 aa  493  9.999999999999999e-139  Sphingomonas wittichii RW1  Bacteria  normal  0.16092  normal 
 
 
-
 
NC_007802  Jann_3894  acyl-CoA dehydrogenase-like  49.06 
 
 
584 aa  492  9.999999999999999e-139  Jannaschia sp. CCS1  Bacteria  normal  normal  0.0512986 
 
 
-
 
NC_007794  Saro_0127  acyl-CoA dehydrogenase-like  44.52 
 
 
572 aa  491  1e-137  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.662664  n/a   
 
 
-
 
NC_008048  Sala_1770  acyl-CoA dehydrogenase-like protein  45.47 
 
 
580 aa  485  1e-136  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.270198 
 
 
-
 
NC_008789  Hhal_1493  acyl-CoA dehydrogenase domain-containing protein  46.31 
 
 
593 aa  486  1e-136  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2260  acyl-CoA dehydrogenase domain-containing protein  46.85 
 
 
589 aa  480  1e-134  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.602591 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  45.79 
 
 
596 aa  476  1e-133  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  45.61 
 
 
596 aa  476  1e-133  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3224  acyl-CoA dehydrogenase domain-containing protein  46.11 
 
 
584 aa  478  1e-133  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  44.81 
 
 
596 aa  478  1e-133  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_008228  Patl_0656  acyl-CoA dehydrogenase-like  43.69 
 
 
586 aa  474  1e-132  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0434  acyl-CoA dehydrogenase domain-containing protein  47.86 
 
 
563 aa  469  1.0000000000000001e-131  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  45.39 
 
 
592 aa  468  9.999999999999999e-131  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  45.23 
 
 
592 aa  466  9.999999999999999e-131  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  45.18 
 
 
595 aa  467  9.999999999999999e-131  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  45.55 
 
 
596 aa  466  9.999999999999999e-131  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  45.28 
 
 
596 aa  464  1e-129  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  43.8 
 
 
594 aa  462  1e-129  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  44.03 
 
 
592 aa  459  9.999999999999999e-129  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  45.76 
 
 
597 aa  460  9.999999999999999e-129  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_007802  Jann_2970  acyl-CoA dehydrogenase-like  44.66 
 
 
591 aa  461  9.999999999999999e-129  Jannaschia sp. CCS1  Bacteria  normal  0.108103  normal  0.100369 
 
 
-
 
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