| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0885 |
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| Symbol | |
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| ID | 6408539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 943315 |
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| End bp | 945105 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710799 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_001989918 |
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| Protein GI | 192289313 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.894915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCT ACAAGGCCCC GGTTGAAGAA GTCGGCTTCC TGCTCAACGA CGTTTTTCAG
TTCGACCGCT ACAACAACCT GCCCGGGTTC GCCGATGCCG CGGCCGACGT GCGCGACGCG
ATCATCAACG AGGCGGCACG GCTGAGCGAG GAAGTGCTGC ACCCGCTCAA CGCGGTCGGT
GATCACGAGG GCTGCACGCG CCATGACGAC GGCAGCGTCG CCACGCCGAA AGGCTTCAAG
GACGCCTACA AGCAGATCGC TGAAGGCGGC TGGATGGGCC TGTCGTCGCC GGCCGAATAT
GGCGGCCAGG GCCTGCCGAT TACGCTGACC CAGACCGTGC AGGAATTCCT GAACTCCGCC
AACATGGCGT TTGCGATGTA CCCGGGCCTG ACCATGGGCG CCGCGGCGGC GCTGACGGTG
CACGGTTCGC CAGAGCAGAA GCAGACCTAT CTGCCCAAGA TGGTGTCCGG CGAATGGACC
GGCACCATGA ACCTCACTGA GCCGCAGTGC GGCACCGATC TCGGCCTGCT ACGGACCAAG
GCGGTGAAGC AGGCGGACGG CAGCTACAAG ATTACCGGTA CCAAGATCTT CATCTCGGCC
GGTGAGCACG ATATGGCCGA CAACATCATC CATCTGGTGT TGGCGCGGAT CGAAGGCGCG
CCGGCCGGCA TCAAGGGTAT TTCGCTGTTC GTCGTGCCGA AATTCCTGGT CAACCCCGAC
GGCACCGTCG GCGCCCGCAA CGGCGTGATG TGCGGCTCGA TCGAGCACAA GATGGGCATC
CACGGCAACG CCACCTGCAC CATGAACTAC GACGGCGCCA CCGGCTGGCT GGTCGGCGAA
GAGAACAAGG GCATGCAGGG CATGTTCGTG ATGATGAACG AGGCTCGCCT CGGCGTCGCG
GTGCAGGGCC TGGCGCAGTC GGAAGTCGCG TATCAGAACG CCGTCGAATA CGCCCGCGAG
CGGCTGCAGG GCCGGGCGCT GTCGGGGCCG AAGGCGACCG ACAAGCCCGC CGATCCGATC
ATCGTGCATC CCGACATCCG CCGCGCACTG CTGACGATGC GCGCGTTCAA CGAGGCGGCG
CGGGCGCTGG TGTTGTGGAC CGCGCTGAAG AGCGACGTCG CGCATCGCTC CAGCGACGCC
AAGGAGCGTC AGACCGCCGA CGACCATCTC GGCCTGATGA CGCCGGTGCT GAAGGGCGTG
CTGACCGACG GCGGCTTCGC CAATGCGGTG GCGGCCCAGC AGGTCTATGG CGGCCACGGC
TACATCGCCG CCAACGGCGT CGAGCAGTTC GTCCGCGATG CCCGCATCGC GATGATCTAC
GAAGGCGCCA ACGGCATTCA GGCGCTCGAC CTGGTCGGCC GCAAGCTGCC GCGTGACGGC
GGTCGTGCCG TGATGGCGTT CTTCGCCGAG GTCGGCGCCT TCGCCAAGGA GCACGGCGGC
GACGAGGCGA TGAAGCCGTT CGTGGCGCCG CTGTCGACCT CGCTCGGCCA TCTGCAGAAG
GCCACCACCT GGCTGATGAT GAATGCGATG GCGCAGCCGG ACAACGCCGG TGCCGCCGCC
ACCGACTACA TGCACCTCTT CGGCCTCGTT GCGATGGGCT ACATGTGGGC CAAGATGGCC
AAGGTGGCGC AGGACAAGAT CGCGGCCGAG GGCGCAAAGC CCTTCCTGAC CCGGAAGCTG
GTCACCGGCC GGTTCTTCGC CGAGCGGATG CTGCCCGAGA CCGCGCTGCG GCTGACCCGG
ATCGAAGCCG GCTGCAGCAC CGTGATGGAA CTGCCGGCGG AAGCGTTCTG A
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| Protein sequence | MTIYKAPVEE VGFLLNDVFQ FDRYNNLPGF ADAAADVRDA IINEAARLSE EVLHPLNAVG
DHEGCTRHDD GSVATPKGFK DAYKQIAEGG WMGLSSPAEY GGQGLPITLT QTVQEFLNSA
NMAFAMYPGL TMGAAAALTV HGSPEQKQTY LPKMVSGEWT GTMNLTEPQC GTDLGLLRTK
AVKQADGSYK ITGTKIFISA GEHDMADNII HLVLARIEGA PAGIKGISLF VVPKFLVNPD
GTVGARNGVM CGSIEHKMGI HGNATCTMNY DGATGWLVGE ENKGMQGMFV MMNEARLGVA
VQGLAQSEVA YQNAVEYARE RLQGRALSGP KATDKPADPI IVHPDIRRAL LTMRAFNEAA
RALVLWTALK SDVAHRSSDA KERQTADDHL GLMTPVLKGV LTDGGFANAV AAQQVYGGHG
YIAANGVEQF VRDARIAMIY EGANGIQALD LVGRKLPRDG GRAVMAFFAE VGAFAKEHGG
DEAMKPFVAP LSTSLGHLQK ATTWLMMNAM AQPDNAGAAA TDYMHLFGLV AMGYMWAKMA
KVAQDKIAAE GAKPFLTRKL VTGRFFAERM LPETALRLTR IEAGCSTVME LPAEAF
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