| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2970 |
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| Symbol | |
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| ID | 3935440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2988265 |
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| End bp | 2990040 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905340 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_510912 |
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| Protein GI | 89055461 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.108103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.100369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCT ATACCGCCCC CACGAAAGAC ATGCAGTTCA TCCTGCACGA TGTGCTGAAC
ATCTCTGCCC AGGACATCCC GGGTTATGGC GATCTGGAGC GTGACTTCAC CAGCGCCATT
CTGGAGGAAG CCGGCAAGAT CTCGACCGAA GTGCTGGCTC CGCTGAATGC GGTTGGCGAC
ACGCAGGGAT GCGTCATGGA AAACGGCGTC GTGCGCACGC CGGACGGGTT CAAGGACGCC
TTCGGCCAGA TGTCCGAGGG CGGCTGGCCC GGCATCGACA TGCCTGAAGA GTTCGGCGGC
ATGGGCCTGC CTTACGTGAT GAACACGGCG GTGGGCGAGA TGTTTTCGTC CTCCAACATG
GCCTTCACCA TGTATCAGGG CCTGACCCAT GGCGCGGCGT CTGCGATCCT GGCCCACGGC
TCGGACGCGC AGAAGGCCAC CTATCTGCCC AAGATGGTGT CGTGTGAATG GACCGGCACC
ATGAACCTGA CGGAGCCCCA TTGCGGCACC GATCTGGGCC TGATGCGCAC CAAGGCGGAG
CCTCAGGGCG ACGGCAGCTA CAAGATTTCC GGCCAGAAGA TTTTCATCTC GGCCGGTGAG
CATGACATGT CCGACAACAT CATCCATCTG GTGCTCGGCA AGATCACCGG CGGCCCCGAG
GGGATCAAGG GTGTGTCGCT GTTCATCGTG CCGAAGTTCC TGGTGAATGA CGATGGTAGC
CTCGGCGCCC GCAACGGCGT GTCATGCGGC AAGATCGAAG AAAAGATGGG CATCCACGGC
AATTCCACCT GCGTCATGAA TTATGACGAG GCGACGGGGT ATCTTCTGGG CGAAGATCAC
AAGGGCATGC GCGCCATGTT CACCATGATG AACGAGGCGC GCCTGGGCGT TGGTATGCAA
GGTGTCAGCC AAGCGGAGGT CGCCTACCAA AACGCGCTGG AGTATGCCAA GGACCGTCTG
CAAGGCCGTG ACGTGACCGG TATCAAGAAC CCCGATGGGC CTGCTGACCC GCTGATCGTC
CACCCCGATA TCCGCCGCAA CCTGATGGAA CAAAAGAGCT TTGCCGAAGG CGCGCGTGCG
TTCCTGCTCT GGGGCTCCAG CCTGATCGAC GCTGCACATC GTGGCGACGA CAAGGACGCC
GATGGTCTGA TTTCCCTCCT GACGCCCGTG ATCAAGGGCT TCCTGACAGA CAAGGGGTTC
GACATGGCCG TCCAGGCCCA GCAGGTCTAT GGCGGGCACG GGTATATCGA GGAATGGGGC
ATGTCCCAGT TCGCCCGCGA TGCCCGGATC GCGATGATCT ATGAAGGGGC CAATGGCGTT
CAGGCGCTGG ATCTGGTGGG CCGCAAGCTG GCCCAGGACG GCGGCAAGCA CGTCATGGCC
TTCTTCGATC TGGTCAAGGG GTTCGCCAAG GACAACGCGG AGGTGGACGG GATGGGAGAA
TTCCTGACAC CGCTCAAGGC CGCGTCCAAG GACCTGCAGG CAGCCGCCAT GTATTTCATG
CAGGAAGGCA TGAAGAACCC CAACAACGCG CTGTCCGGCT CCACCGACTT CATGCACCTC
TTCGGGCACA CCTGCATGGG TCTGATGTGG GCAATGATGG CGAAGGCATC GCTGGAAGCG
CTGGCCGCTG GTACGTCTGA CCCGGTGTTC CACGAGACGA AATTGGCCAC GGGTCGCTTC
TACATGACGC GCACCCTGCC GATGACCGCG ACGCACCTGG CCCGCATCCA CGCGGGCGGC
GAGACGGTCA TGGCGCTGGA CGCGGCGAAC TTCTGA
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| Protein sequence | MPSYTAPTKD MQFILHDVLN ISAQDIPGYG DLERDFTSAI LEEAGKISTE VLAPLNAVGD
TQGCVMENGV VRTPDGFKDA FGQMSEGGWP GIDMPEEFGG MGLPYVMNTA VGEMFSSSNM
AFTMYQGLTH GAASAILAHG SDAQKATYLP KMVSCEWTGT MNLTEPHCGT DLGLMRTKAE
PQGDGSYKIS GQKIFISAGE HDMSDNIIHL VLGKITGGPE GIKGVSLFIV PKFLVNDDGS
LGARNGVSCG KIEEKMGIHG NSTCVMNYDE ATGYLLGEDH KGMRAMFTMM NEARLGVGMQ
GVSQAEVAYQ NALEYAKDRL QGRDVTGIKN PDGPADPLIV HPDIRRNLME QKSFAEGARA
FLLWGSSLID AAHRGDDKDA DGLISLLTPV IKGFLTDKGF DMAVQAQQVY GGHGYIEEWG
MSQFARDARI AMIYEGANGV QALDLVGRKL AQDGGKHVMA FFDLVKGFAK DNAEVDGMGE
FLTPLKAASK DLQAAAMYFM QEGMKNPNNA LSGSTDFMHL FGHTCMGLMW AMMAKASLEA
LAAGTSDPVF HETKLATGRF YMTRTLPMTA THLARIHAGG ETVMALDAAN F
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