More than 300 homologs were found in PanDaTox collection
for query gene Pden_3224 on replicon NC_008687
Organism: Paracoccus denitrificans PD1222



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008687  Pden_3224  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
584 aa  1187    Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0623  acyl-CoA dehydrogenase domain-containing protein  70.79 
 
 
585 aa  784    Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3270  acyl-CoA dehydrogenase domain-containing protein  57.68 
 
 
589 aa  661    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.928041  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  53.04 
 
 
594 aa  622  1e-177  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  52.53 
 
 
594 aa  617  1e-175  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  50.51 
 
 
592 aa  569  1e-161  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  51.19 
 
 
591 aa  570  1e-161  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  50.17 
 
 
596 aa  570  1e-161  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  50.17 
 
 
592 aa  567  1e-160  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  49.41 
 
 
597 aa  568  1e-160  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  49.66 
 
 
598 aa  564  1.0000000000000001e-159  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  49.83 
 
 
592 aa  563  1.0000000000000001e-159  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  49.58 
 
 
595 aa  563  1.0000000000000001e-159  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_002947  PP_3554  acyl-CoA dehydrogenase domain-containing protein  50.34 
 
 
589 aa  559  1e-158  Pseudomonas putida KT2440  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  49.21 
 
 
595 aa  559  1e-158  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  48.98 
 
 
596 aa  559  1e-158  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  49.57 
 
 
590 aa  558  1e-158  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  48.57 
 
 
595 aa  559  1e-158  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  48.14 
 
 
596 aa  560  1e-158  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  47.8 
 
 
596 aa  560  1e-158  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
597 aa  561  1e-158  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
595 aa  556  1e-157  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  48.23 
 
 
595 aa  556  1e-157  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.73 
 
 
595 aa  558  1e-157  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  48.23 
 
 
595 aa  556  1e-157  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  48.99 
 
 
598 aa  556  1e-157  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  48.4 
 
 
595 aa  557  1e-157  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  48.23 
 
 
595 aa  556  1e-157  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
595 aa  556  1e-157  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
626 aa  557  1e-157  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  48.24 
 
 
595 aa  556  1e-157  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2220  acyl-CoA dehydrogenase domain-containing protein  50.34 
 
 
594 aa  556  1e-157  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2368  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
589 aa  554  1e-156  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  49.32 
 
 
596 aa  553  1e-156  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  47.72 
 
 
595 aa  554  1e-156  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010322  PputGB1_2808  acyl-CoA dehydrogenase domain-containing protein  50.25 
 
 
592 aa  552  1e-156  Pseudomonas putida GB-1  Bacteria  normal  0.566358  normal 
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  48.98 
 
 
592 aa  549  1e-155  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  48.65 
 
 
595 aa  548  1e-155  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
592 aa  550  1e-155  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_009512  Pput_2665  acyl-CoA dehydrogenase domain-containing protein  50 
 
 
592 aa  549  1e-155  Pseudomonas putida F1  Bacteria  normal  0.755851  normal 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
601 aa  551  1e-155  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  48.06 
 
 
595 aa  551  1e-155  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  47.72 
 
 
595 aa  550  1e-155  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_007005  Psyr_4677  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.65 
 
 
592 aa  551  1e-155  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0983724  normal 
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  49.32 
 
 
592 aa  551  1e-155  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  48.06 
 
 
595 aa  551  1e-155  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  48.31 
 
 
592 aa  549  1e-155  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  47.72 
 
 
595 aa  550  1e-155  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  47.56 
 
 
599 aa  550  1e-155  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  48.73 
 
 
596 aa  550  1e-155  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  48.06 
 
 
595 aa  551  1e-155  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
595 aa  551  1e-155  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  48.5 
 
 
600 aa  550  1e-155  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  48.99 
 
 
593 aa  551  1e-155  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  48.06 
 
 
595 aa  551  1e-155  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  49.15 
 
 
592 aa  548  1e-154  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  46.11 
 
 
598 aa  546  1e-154  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  48.32 
 
 
598 aa  547  1e-154  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0506  acyl-CoA dehydrogenase family protein  47.97 
 
 
592 aa  542  1e-153  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3132  acyl-CoA dehydrogenase family protein  47.79 
 
 
589 aa  545  1e-153  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  47.14 
 
 
598 aa  542  1e-153  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_010002  Daci_1337  acyl-CoA dehydrogenase domain-containing protein  47.91 
 
 
601 aa  545  1e-153  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  48.17 
 
 
596 aa  543  1e-153  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  46.36 
 
 
595 aa  540  9.999999999999999e-153  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  48.41 
 
 
596 aa  539  9.999999999999999e-153  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  46.66 
 
 
595 aa  541  9.999999999999999e-153  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_009656  PSPA7_0899  putative acyl-CoA dehydrogenase  48.99 
 
 
593 aa  540  9.999999999999999e-153  Pseudomonas aeruginosa PA7  Bacteria  normal  0.183433  n/a   
 
 
-
 
NC_011757  Mchl_3569  acyl-CoA dehydrogenase domain protein  48.65 
 
 
596 aa  538  9.999999999999999e-153  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.452125 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  47.63 
 
 
596 aa  536  1e-151  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_008025  Dgeo_0105  acyl-CoA dehydrogenase-like protein  48.08 
 
 
612 aa  536  1e-151  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3245  acyl-CoA dehydrogenase domain-containing protein  48.48 
 
 
596 aa  536  1e-151  Methylobacterium extorquens PA1  Bacteria  normal  0.532993  normal  0.0328142 
 
 
-
 
NC_010506  Swoo_1916  acyl-CoA dehydrogenase domain-containing protein  48.62 
 
 
596 aa  535  1e-151  Shewanella woodyi ATCC 51908  Bacteria  normal  0.839569  normal  0.565849 
 
 
-
 
NC_007204  Psyc_0964  putative acyl-CoA dehydrogenase  48.57 
 
 
594 aa  533  1e-150  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.295286 
 
 
-
 
NC_007794  Saro_2105  acyl-CoA dehydrogenase-like  46.21 
 
 
600 aa  535  1e-150  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0867626  n/a   
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  46.96 
 
 
598 aa  533  1e-150  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_008687  Pden_2868  acyl-CoA dehydrogenase domain-containing protein  47.32 
 
 
592 aa  531  1e-150  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.259312 
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  46.46 
 
 
598 aa  533  1e-150  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  49.81 
 
 
596 aa  535  1e-150  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5238  acyl-CoA dehydrogenase domain protein  49.07 
 
 
597 aa  531  1e-149  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  46.63 
 
 
592 aa  530  1e-149  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_010531  Pnec_0962  acyl-CoA dehydrogenase domain protein  45.93 
 
 
595 aa  530  1e-149  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  47.83 
 
 
596 aa  530  1e-149  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_007969  Pcryo_1453  acyl-CoA dehydrogenase-like  48.4 
 
 
594 aa  531  1e-149  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  47.77 
 
 
596 aa  528  1e-148  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  47.31 
 
 
598 aa  528  1e-148  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  48.06 
 
 
592 aa  525  1e-148  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  47.23 
 
 
591 aa  526  1e-148  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2696  acyl-CoA dehydrogenase domain-containing protein  45.45 
 
 
596 aa  528  1e-148  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3519  acyl-CoA dehydrogenase-like  46.81 
 
 
598 aa  527  1e-148  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3441  acyl-CoA dehydrogenase domain protein  47.47 
 
 
596 aa  527  1e-148  Methylobacterium populi BJ001  Bacteria  normal  0.189286  normal 
 
 
-
 
NC_004347  SO_2768  acyl-CoA dehydrogenase family protein  46.54 
 
 
596 aa  525  1e-147  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2164  acyl-CoA dehydrogenase domain-containing protein  47.39 
 
 
596 aa  525  1e-147  Shewanella loihica PV-4  Bacteria  normal  normal  0.764228 
 
 
-
 
NC_009524  PsycPRwf_0911  acyl-CoA dehydrogenase domain-containing protein  47.2 
 
 
594 aa  525  1e-147  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  45.04 
 
 
598 aa  523  1e-147  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_010335  Caul_5262  acyl-CoA dehydrogenase domain-containing protein  48.82 
 
 
590 aa  523  1e-147  Caulobacter sp. K31  Bacteria  normal  0.935706  hitchhiker  0.000268053 
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  44.11 
 
 
597 aa  519  1e-146  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1224  acyl-CoA dehydrogenase domain-containing protein  46.68 
 
 
598 aa  519  1e-146  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  44.11 
 
 
597 aa  519  1e-146  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_008577  Shewana3_2552  acyl-CoA dehydrogenase domain-containing protein  46.04 
 
 
596 aa  521  1e-146  Shewanella sp. ANA-3  Bacteria  normal  0.0690519  normal 
 
 
-
 
NC_008322  Shewmr7_2459  acyl-CoA dehydrogenase domain-containing protein  45.87 
 
 
596 aa  520  1e-146  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00932419 
 
 
-
 
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