| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0506 |
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| Symbol | |
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| ID | 1182115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 553477 |
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| End bp | 555255 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391873 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_790354 |
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| Protein GI | 28867735 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACT ACAAAGCGCC ACTGCGCGAT ATGCGCTTCG TCCTCAATGA AGTGTTCGAA
GTTTCCAGAC TCTGGGCTCA ACTGCCTGAG CTGGCTGAAA CAGTCGACGC CGAAACGGTC
GATGCCATTC TTGAAGAAGC CGGCAAAGTC ACCAGCAAGA CCATCGCCCC GCTGAGCCGC
AACGGTGATG AGGAAGGCTG CCACTGGAAA GACACTGTCG TGACCACTCC GGCAGGTTTC
CCGGAGGCCT ACCGGATTTA CGCAGAGGGC GGCTGGGTCG GCGTGGGTGG CGACCCCGTG
TTTGGCGGTA TGGGCATGCC CAAGATTGTT TCGGCTCAGG TCGAGGAGAT GATCAACTCC
GCCAGCCTGG CGTTCGGCCT GTACGCGATG CTGACCTCCG GCGCCTGCGT ATCGATAAAC
ACCCACGCCA CCGAAGCGCT CAAGGCCAAA TTTTTGCCCA ACATGTACTC GGGCGTCTGG
GCAGGTTCGA TGTGCCTGAC CGAGGCGCAC GCCGGTACGG ACCTTGGCAT GATTCGCACT
AAAGCCGAAC CGCAGACGGA CGGCGCCTAC ACGATCACTG GCAGCAAGAT TTTCATCACC
GGCGGTGAGC ACGACCTGAC CGAGAACATC ATTCACCTGG TACTGGCCAA GCTGCCGGAC
GCTCCGGCCG GGCCGAAAGG GATCTCGCTG TTTTTGGTGC CCAAGTTCAT GGTCGGTGAC
GACGGCAGCC TCGGTGCGCG CAATACCGTC AGTTGTGGTT CCATTGAGCA CAAGATGGGT
ATTCAGGCGT CGGCCACCTG TGTGATGAAC TTCGATGACG CCGTCGGTTA TCTGATCGGT
GAGCCGAACA AGGGCCTGGC GGCGATGTTC ACCATGATGA ATTACGAACG TCTGGGTGTC
GGTATCCAGG GTCTGGCGTC CGGTGTGCAG TCTTATCAGA ACGCTGTCGA GTACGCTGTT
GATCGTCTGC AAAGCCGTGC CCCGACCGGT GCACAGAACA AGGACAAGGC CGCTGATCCG
ATCATCGTCC ACCCTGATGT GCGGCGCATG CTGCTGACCA TGAAAGCCTT CAACGAAGGC
GGTCGGGCAT TCTCCAGTTA CGTTGCTCTG CAACTGGACA TCGCCAAGTT CAGCGAAGAT
GACGCCGCGC GTAAACGTGC CGATGATCTG GCAGCGCTGC TCACGCCAGT CGCCAAGGCC
TTCCTGAGCG ACATCGGTCT GGAAACCACG GTCCACGGCC AGCAGGTGTT CGGTGGTCAC
GGTTACATTC GTGAGTGGGG TCAGGAGCAA CTGGTGCGTG ACGTGCGTAT CACGCAGATC
TATGAAGGCA CCAACGGCAT TCAGGCACTG GACCTGGTGG GGCGCAAGAT CGTCGGCTCC
AATGGCGCGC TCTATCAGTT GTTCTCGGAT GAAGTGCGCC AGTTCATCGA TACTTCCGAT
AGCTCGCTCG GTGAATTTAC CCGACCGCTG ACGGCAGCGT TGAATATGCT GGACGAGCTG
ACCGGCTGGG TGCTGGACCG CTCGCGTAGC AACCCGAACG AGATCGGCGC TGCATCCGTT
GAGTACCTGC ATCTGTTCGG TTACACCGCT TACGCCTACA TGTGGGCGAT GATGGCCAAG
GCAGCCTTTG GCAAGGAGCA GCAGGACGAC TTTTATGCGA GCAAGCTGGG CACGGCGCGC
TTCTACTTCG CCCGCCTGCT GCCGCGTATT CATTCGCTGG ATGCCTCGGT GCGGGCAGGC
AGTGAATCAC TGTTTTTGTT GGAGGCATCA CAATTCTGA
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| Protein sequence | MADYKAPLRD MRFVLNEVFE VSRLWAQLPE LAETVDAETV DAILEEAGKV TSKTIAPLSR
NGDEEGCHWK DTVVTTPAGF PEAYRIYAEG GWVGVGGDPV FGGMGMPKIV SAQVEEMINS
ASLAFGLYAM LTSGACVSIN THATEALKAK FLPNMYSGVW AGSMCLTEAH AGTDLGMIRT
KAEPQTDGAY TITGSKIFIT GGEHDLTENI IHLVLAKLPD APAGPKGISL FLVPKFMVGD
DGSLGARNTV SCGSIEHKMG IQASATCVMN FDDAVGYLIG EPNKGLAAMF TMMNYERLGV
GIQGLASGVQ SYQNAVEYAV DRLQSRAPTG AQNKDKAADP IIVHPDVRRM LLTMKAFNEG
GRAFSSYVAL QLDIAKFSED DAARKRADDL AALLTPVAKA FLSDIGLETT VHGQQVFGGH
GYIREWGQEQ LVRDVRITQI YEGTNGIQAL DLVGRKIVGS NGALYQLFSD EVRQFIDTSD
SSLGEFTRPL TAALNMLDEL TGWVLDRSRS NPNEIGAASV EYLHLFGYTA YAYMWAMMAK
AAFGKEQQDD FYASKLGTAR FYFARLLPRI HSLDASVRAG SESLFLLEAS QF
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