More than 300 homologs were found in PanDaTox collection
for query gene PputGB1_2368 on replicon NC_010322
Organism: Pseudomonas putida GB-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  65.77 
 
 
592 aa  788    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3554  acyl-CoA dehydrogenase domain-containing protein  94.4 
 
 
589 aa  1142    Pseudomonas putida KT2440  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_003910  CPS_4476  acyl-CoA dehydrogenase family protein  54.47 
 
 
602 aa  665    Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  72.51 
 
 
591 aa  866    Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_004347  SO_2395  acyl-CoA dehydrogenase family protein  55.89 
 
 
585 aa  646    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0506  acyl-CoA dehydrogenase family protein  63.41 
 
 
592 aa  778    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2665  acyl-CoA dehydrogenase domain-containing protein  63.41 
 
 
592 aa  757    Pseudomonas putida F1  Bacteria  normal  0.755851  normal 
 
 
-
 
NC_007005  Psyr_4677  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  63.41 
 
 
592 aa  776    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0983724  normal 
 
 
-
 
NC_007204  Psyc_0964  putative acyl-CoA dehydrogenase  54.13 
 
 
594 aa  635    Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.295286 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  65.94 
 
 
592 aa  795    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_2389  acyl-CoA dehydrogenase domain-containing protein  56.23 
 
 
585 aa  651    Shewanella baltica OS195  Bacteria  hitchhiker  0.0000323201  unclonable  0.0000144504 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  65.09 
 
 
592 aa  795    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  73.86 
 
 
593 aa  884    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_009052  Sbal_2077  acyl-CoA dehydrogenase domain-containing protein  56.06 
 
 
585 aa  650    Shewanella baltica OS155  Bacteria  unclonable  0.0000000861325  n/a   
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  66.27 
 
 
592 aa  795    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2073  acyl-CoA dehydrogenase domain protein  55.56 
 
 
585 aa  644    Shewanella baltica OS223  Bacteria  decreased coverage  0.0000286004  hitchhiker  0.00000000164585 
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  65.94 
 
 
592 aa  790    Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  77.33 
 
 
590 aa  924    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1984  acyl-CoA dehydrogenase domain-containing protein  56.64 
 
 
585 aa  650    Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000742093  hitchhiker  0.00000000303591 
 
 
-
 
NC_009092  Shew_1961  acyl-CoA dehydrogenase domain-containing protein  55.29 
 
 
583 aa  635    Shewanella loihica PV-4  Bacteria  unclonable  0.00000164987  hitchhiker  0.00189084 
 
 
-
 
NC_009438  Sputcn32_2035  acyl-CoA dehydrogenase domain-containing protein  55.82 
 
 
585 aa  647    Shewanella putrefaciens CN-32  Bacteria  normal  0.0140722  n/a   
 
 
-
 
NC_010322  PputGB1_2368  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
589 aa  1202    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  54.94 
 
 
594 aa  635    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_007912  Sde_3132  acyl-CoA dehydrogenase family protein  59.19 
 
 
589 aa  687    Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0899  putative acyl-CoA dehydrogenase  73.52 
 
 
593 aa  869    Pseudomonas aeruginosa PA7  Bacteria  normal  0.183433  n/a   
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  65.43 
 
 
592 aa  792    Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_007954  Sden_1761  acyl-CoA dehydrogenase-like protein  55.99 
 
 
583 aa  654    Shewanella denitrificans OS217  Bacteria  normal  0.170818  n/a   
 
 
-
 
NC_010322  PputGB1_2808  acyl-CoA dehydrogenase domain-containing protein  64.42 
 
 
592 aa  758    Pseudomonas putida GB-1  Bacteria  normal  0.566358  normal 
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  60.71 
 
 
596 aa  738    Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_009665  Shew185_2272  acyl-CoA dehydrogenase domain-containing protein  56.06 
 
 
585 aa  650    Shewanella baltica OS185  Bacteria  decreased coverage  0.00000131801  n/a   
 
 
-
 
NC_007969  Pcryo_1453  acyl-CoA dehydrogenase-like  54.13 
 
 
594 aa  640    Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2220  acyl-CoA dehydrogenase domain-containing protein  94.4 
 
 
594 aa  1140    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  56.59 
 
 
598 aa  642    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  65.6 
 
 
592 aa  786    Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_008321  Shewmr4_1931  acyl-CoA dehydrogenase domain-containing protein  56.9 
 
 
585 aa  652    Shewanella sp. MR-4  Bacteria  hitchhiker  0.00101819  hitchhiker  0.00000000203538 
 
 
-
 
NC_008322  Shewmr7_2047  acyl-CoA dehydrogenase domain-containing protein  56.9 
 
 
585 aa  652    Shewanella sp. MR-7  Bacteria  unclonable  0.0000359523  hitchhiker  0.00243914 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  66.27 
 
 
592 aa  795    Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  57.53 
 
 
594 aa  658    Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  55.76 
 
 
598 aa  633  1e-180  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2115  acyl-CoA dehydrogenase domain-containing protein  53.96 
 
 
585 aa  633  1e-180  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000000107546  n/a   
 
 
-
 
NC_009901  Spea_2081  acyl-CoA dehydrogenase domain-containing protein  52.69 
 
 
586 aa  630  1e-179  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2323  acyl-CoA dehydrogenase domain-containing protein  53.7 
 
 
585 aa  627  1e-178  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.00000258796  normal  0.0587246 
 
 
-
 
NC_009524  PsycPRwf_0911  acyl-CoA dehydrogenase domain-containing protein  52.95 
 
 
594 aa  626  1e-178  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2292  acyl-CoA dehydrogenase domain-containing protein  53.37 
 
 
585 aa  624  1e-177  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.00000293034  hitchhiker  0.0000000044095 
 
 
-
 
NC_008700  Sama_1743  acyl-CoA dehydrogenase family protein  55.18 
 
 
578 aa  620  1e-176  Shewanella amazonensis SB2B  Bacteria  normal  0.0351392  hitchhiker  0.00338381 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  52.92 
 
 
598 aa  616  1e-175  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  51.76 
 
 
595 aa  613  9.999999999999999e-175  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  51.26 
 
 
595 aa  608  1e-173  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  51.93 
 
 
595 aa  607  9.999999999999999e-173  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  52.25 
 
 
596 aa  601  1.0000000000000001e-171  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  51.26 
 
 
595 aa  602  1.0000000000000001e-171  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  50.58 
 
 
596 aa  600  1e-170  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  50.42 
 
 
596 aa  599  1e-170  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  51.58 
 
 
626 aa  597  1e-169  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  51.59 
 
 
592 aa  593  1e-168  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_002947  PP_2048  acyl-CoA dehydrogenase, putative  54.19 
 
 
616 aa  589  1e-167  Pseudomonas putida KT2440  Bacteria  normal  0.681425  normal 
 
 
-
 
NC_009512  Pput_3693  acyl-CoA dehydrogenase domain-containing protein  54.27 
 
 
591 aa  591  1e-167  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  49.08 
 
 
595 aa  588  1e-166  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  49.66 
 
 
595 aa  585  1e-166  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  49.66 
 
 
595 aa  585  1e-166  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
595 aa  586  1e-166  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  49.66 
 
 
595 aa  585  1e-166  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  50.25 
 
 
595 aa  587  1e-166  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  49.66 
 
 
595 aa  585  1e-166  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0380  acyl-CoA dehydrogenase domain-containing protein  53.6 
 
 
596 aa  587  1e-166  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  49.66 
 
 
595 aa  587  1e-166  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  49.08 
 
 
595 aa  588  1e-166  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_01173  acyl-CoA dehydrogenase  52.34 
 
 
597 aa  585  1e-166  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.520854  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  49.08 
 
 
595 aa  588  1e-166  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_010531  Pnec_0962  acyl-CoA dehydrogenase domain protein  49.33 
 
 
595 aa  582  1.0000000000000001e-165  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  49.33 
 
 
595 aa  582  1.0000000000000001e-165  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  49.33 
 
 
595 aa  582  1.0000000000000001e-165  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  49.33 
 
 
595 aa  582  1.0000000000000001e-165  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  49.92 
 
 
595 aa  583  1.0000000000000001e-165  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_009656  PSPA7_5930  putative acyl-CoA dehydrogenase  53.5 
 
 
596 aa  583  1.0000000000000001e-165  Pseudomonas aeruginosa PA7  Bacteria  normal  0.505334  n/a   
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  49.33 
 
 
601 aa  583  1.0000000000000001e-165  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
NC_002947  PP_0368  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
601 aa  578  1e-164  Pseudomonas putida KT2440  Bacteria  normal  0.335716  normal 
 
 
-
 
NC_007492  Pfl01_5170  Acyl-CoA dehydrogenase-like  49.92 
 
 
601 aa  579  1e-164  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.131109  normal  0.317042 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  49.08 
 
 
595 aa  581  1e-164  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  48.42 
 
 
599 aa  578  1e-164  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  49.16 
 
 
595 aa  581  1e-164  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3148  acyl-CoA dehydrogenase domain-containing protein  52.61 
 
 
595 aa  579  1e-164  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  51.59 
 
 
601 aa  581  1e-164  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_68510  putative acyl-CoA dehydrogenase  53.92 
 
 
596 aa  580  1e-164  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  decreased coverage  0.0032913  normal  0.251007 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  50.08 
 
 
595 aa  581  1e-164  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0394  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
601 aa  578  1e-164  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  49.58 
 
 
599 aa  577  1.0000000000000001e-163  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_010322  PputGB1_0398  acyl-CoA dehydrogenase domain-containing protein  49.42 
 
 
601 aa  577  1.0000000000000001e-163  Pseudomonas putida GB-1  Bacteria  normal  0.257074  normal 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  51.17 
 
 
603 aa  576  1.0000000000000001e-163  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  47.58 
 
 
598 aa  574  1.0000000000000001e-162  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_010501  PputW619_4834  acyl-CoA dehydrogenase domain-containing protein  49.42 
 
 
601 aa  573  1.0000000000000001e-162  Pseudomonas putida W619  Bacteria  normal  normal  0.649579 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  50.17 
 
 
596 aa  573  1.0000000000000001e-162  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_010581  Bind_3270  acyl-CoA dehydrogenase domain-containing protein  49.41 
 
 
589 aa  574  1.0000000000000001e-162  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.928041  normal 
 
 
-
 
NC_007005  Psyr_4681  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  48.75 
 
 
601 aa  569  1e-161  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4081  acyl-CoA dehydrogenase domain-containing protein  48.16 
 
 
601 aa  569  1e-161  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  46.49 
 
 
598 aa  571  1e-161  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  48.25 
 
 
597 aa  565  1e-160  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_004578  PSPTO_0500  acyl-CoA dehydrogenase family protein  48.33 
 
 
601 aa  566  1e-160  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.837085  n/a   
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  49.92 
 
 
591 aa  566  1e-160  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3891  acyl-CoA dehydrogenase domain-containing protein  50.86 
 
 
606 aa  567  1e-160  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
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