More than 300 homologs were found in PanDaTox collection
for query gene Dshi_0839 on replicon NC_009952
Organism: Dinoroseobacter shibae DFL 12



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  51.17 
 
 
594 aa  646    Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_3245  acyl-CoA dehydrogenase domain-containing protein  57.19 
 
 
596 aa  688    Methylobacterium extorquens PA1  Bacteria  normal  0.532993  normal  0.0328142 
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  59.36 
 
 
597 aa  724    Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  58.86 
 
 
597 aa  730    Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  58.19 
 
 
597 aa  687    Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_010725  Mpop_3441  acyl-CoA dehydrogenase domain protein  58.03 
 
 
596 aa  690    Methylobacterium populi BJ001  Bacteria  normal  0.189286  normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  57.1 
 
 
598 aa  698    Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  57.19 
 
 
596 aa  702    Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  57.93 
 
 
598 aa  702    Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2199  putative acyl-CoA dehydrogenase  69.09 
 
 
591 aa  843    Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.202829  n/a   
 
 
-
 
NC_009428  Rsph17025_2293  acyl-CoA dehydrogenase domain-containing protein  69.59 
 
 
591 aa  846    Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  57.53 
 
 
596 aa  686    Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_007794  Saro_2105  acyl-CoA dehydrogenase-like  54.3 
 
 
600 aa  644    Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0867626  n/a   
 
 
-
 
NC_007802  Jann_2970  acyl-CoA dehydrogenase-like  72.73 
 
 
591 aa  918    Jannaschia sp. CCS1  Bacteria  normal  0.108103  normal  0.100369 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  50.92 
 
 
594 aa  647    Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  57.19 
 
 
596 aa  681    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_007925  RPC_0737  acyl-CoA dehydrogenase-like  57.02 
 
 
596 aa  673    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.67515 
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  59.03 
 
 
597 aa  719    Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_010338  Caul_0131  acyl-CoA dehydrogenase domain-containing protein  56.45 
 
 
596 aa  654    Caulobacter sp. K31  Bacteria  normal  0.723341  normal 
 
 
-
 
NC_007958  RPD_0804  acyl-CoA dehydrogenase-like  57.69 
 
 
596 aa  694    Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5238  acyl-CoA dehydrogenase domain protein  57.19 
 
 
597 aa  658    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  58.19 
 
 
595 aa  698    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_2868  acyl-CoA dehydrogenase domain-containing protein  70.27 
 
 
592 aa  871    Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.259312 
 
 
-
 
NC_008044  TM1040_1557  acyl-CoA dehydrogenase-like  70.49 
 
 
593 aa  893    Ruegeria sp. TM1040  Bacteria  normal  normal  0.538695 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  54.68 
 
 
600 aa  655    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_009952  Dshi_0839  acyl-CoA dehydrogenase domain protein  100 
 
 
592 aa  1228    Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.704355 
 
 
-
 
NC_008254  Meso_0023  acyl-CoA dehydrogenase-like  55.93 
 
 
598 aa  667    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  59.83 
 
 
597 aa  728    Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  59.36 
 
 
597 aa  724    Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_011757  Mchl_3569  acyl-CoA dehydrogenase domain protein  57.19 
 
 
596 aa  690    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.452125 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  57.93 
 
 
598 aa  701    Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_008347  Mmar10_0538  acyl-CoA dehydrogenase domain-containing protein  56.13 
 
 
596 aa  645    Maricaulis maris MCS10  Bacteria  normal  normal  0.325503 
 
 
-
 
NC_009092  Shew_2164  acyl-CoA dehydrogenase domain-containing protein  52.6 
 
 
596 aa  635    Shewanella loihica PV-4  Bacteria  normal  normal  0.764228 
 
 
-
 
NC_009049  Rsph17029_0874  acyl-CoA dehydrogenase domain-containing protein  69.43 
 
 
591 aa  840    Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.942858  normal  0.751206 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  51.42 
 
 
596 aa  634  1e-180  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  51.5 
 
 
592 aa  630  1e-179  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  51.09 
 
 
596 aa  625  1e-178  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  51.76 
 
 
626 aa  621  1e-176  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  50.75 
 
 
595 aa  616  1e-175  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  48.74 
 
 
598 aa  615  1e-175  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5170  Acyl-CoA dehydrogenase-like  50 
 
 
601 aa  613  9.999999999999999e-175  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.131109  normal  0.317042 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  614  9.999999999999999e-175  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  614  9.999999999999999e-175  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  50.08 
 
 
595 aa  614  9.999999999999999e-175  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0368  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
601 aa  608  1e-173  Pseudomonas putida KT2440  Bacteria  normal  0.335716  normal 
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  608  1e-173  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2552  acyl-CoA dehydrogenase domain-containing protein  50.92 
 
 
596 aa  608  1e-173  Shewanella sp. ANA-3  Bacteria  normal  0.0690519  normal 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  608  1e-173  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  49.92 
 
 
601 aa  610  1e-173  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  49.83 
 
 
597 aa  609  1e-173  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2696  acyl-CoA dehydrogenase domain-containing protein  50.59 
 
 
596 aa  610  1e-173  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  610  1e-173  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  610  1e-173  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  51.76 
 
 
598 aa  610  1e-173  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  608  1e-173  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  608  1e-173  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  49.92 
 
 
599 aa  609  1e-173  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  611  1e-173  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  608  1e-173  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0394  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
601 aa  608  1e-173  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  610  1e-173  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  50.08 
 
 
595 aa  610  1e-173  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  51.59 
 
 
596 aa  610  1e-173  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  49.92 
 
 
595 aa  607  9.999999999999999e-173  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_004347  SO_2768  acyl-CoA dehydrogenase family protein  50.92 
 
 
596 aa  605  9.999999999999999e-173  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1916  acyl-CoA dehydrogenase domain-containing protein  50.75 
 
 
596 aa  607  9.999999999999999e-173  Shewanella woodyi ATCC 51908  Bacteria  normal  0.839569  normal  0.565849 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  49.92 
 
 
595 aa  606  9.999999999999999e-173  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.25 
 
 
595 aa  607  9.999999999999999e-173  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  49.75 
 
 
595 aa  605  9.999999999999999e-173  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  49.5 
 
 
598 aa  606  9.999999999999999e-173  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_4081  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
601 aa  607  9.999999999999999e-173  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  49.92 
 
 
595 aa  606  9.999999999999999e-173  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  49.33 
 
 
598 aa  605  9.999999999999999e-173  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  49.42 
 
 
601 aa  607  9.999999999999999e-173  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  49.92 
 
 
595 aa  606  9.999999999999999e-173  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_010322  PputGB1_0398  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
601 aa  608  9.999999999999999e-173  Pseudomonas putida GB-1  Bacteria  normal  0.257074  normal 
 
 
-
 
NC_008321  Shewmr4_2387  acyl-CoA dehydrogenase domain-containing protein  51.09 
 
 
596 aa  608  9.999999999999999e-173  Shewanella sp. MR-4  Bacteria  normal  0.109961  normal 
 
 
-
 
NC_008322  Shewmr7_2459  acyl-CoA dehydrogenase domain-containing protein  50.92 
 
 
596 aa  607  9.999999999999999e-173  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00932419 
 
 
-
 
NC_009656  PSPA7_0606  putative acyl-CoA dehydrogenase  48.83 
 
 
601 aa  603  1.0000000000000001e-171  Pseudomonas aeruginosa PA7  Bacteria  normal  0.941769  n/a   
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  47.99 
 
 
599 aa  604  1.0000000000000001e-171  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  48.83 
 
 
601 aa  602  1.0000000000000001e-171  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4681  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  49.16 
 
 
601 aa  603  1.0000000000000001e-171  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  51.35 
 
 
591 aa  602  1.0000000000000001e-171  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1885  putative acyl-CoA dehydrogenase  48.83 
 
 
595 aa  604  1.0000000000000001e-171  Saccharophagus degradans 2-40  Bacteria  normal  0.137162  normal 
 
 
-
 
NC_010002  Daci_1337  acyl-CoA dehydrogenase domain-containing protein  49.75 
 
 
601 aa  602  1.0000000000000001e-171  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  49.92 
 
 
595 aa  605  1.0000000000000001e-171  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  49.83 
 
 
598 aa  602  1.0000000000000001e-171  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_010501  PputW619_4834  acyl-CoA dehydrogenase domain-containing protein  49 
 
 
601 aa  603  1.0000000000000001e-171  Pseudomonas putida W619  Bacteria  normal  normal  0.649579 
 
 
-
 
NC_008463  PA14_06600  putative acyl-CoA dehydrogenase  48.83 
 
 
601 aa  603  1.0000000000000001e-171  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  48.07 
 
 
598 aa  598  1e-170  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_009901  Spea_1852  acyl-CoA dehydrogenase domain-containing protein  50.25 
 
 
596 aa  600  1e-170  Shewanella pealeana ATCC 700345  Bacteria  normal  0.265206  n/a   
 
 
-
 
NC_009052  Sbal_1726  acyl-CoA dehydrogenase domain-containing protein  51.42 
 
 
596 aa  599  1e-170  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  50.99 
 
 
596 aa  600  1e-170  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_008025  Dgeo_0105  acyl-CoA dehydrogenase-like protein  51.07 
 
 
612 aa  600  1e-170  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1766  acyl-CoA dehydrogenase domain-containing protein  51.09 
 
 
596 aa  596  1e-169  Shewanella baltica OS195  Bacteria  normal  0.0439337  normal  0.311175 
 
 
-
 
NC_004578  PSPTO_0500  acyl-CoA dehydrogenase family protein  48.83 
 
 
601 aa  597  1e-169  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.837085  n/a   
 
 
-
 
NC_009665  Shew185_1723  acyl-CoA dehydrogenase domain-containing protein  51.26 
 
 
596 aa  597  1e-169  Shewanella baltica OS185  Bacteria  normal  0.0115108  n/a   
 
 
-
 
NC_011663  Sbal223_2566  acyl-CoA dehydrogenase domain protein  51.26 
 
 
596 aa  596  1e-169  Shewanella baltica OS223  Bacteria  hitchhiker  0.00594798  hitchhiker  0.000173017 
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  49.33 
 
 
598 aa  595  1e-169  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  48.49 
 
 
598 aa  592  1e-168  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
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