| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1557 |
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| Symbol | |
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| ID | 4075855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1661878 |
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| End bp | 1663659 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006870 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_613552 |
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| Protein GI | 99081398 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.538695 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCT ATACCGCACC CACCAAGGAC ACCCAATTCG TCCTGCACGA TGTTCTGAAC
ATCAAGGACG CAGGAATCCC CGGCTATGAC GAGCTGGAGC CCGATTTCAC CGGCGCCGTT
CTGGAAGAAG CCGGCAAGAT TGCCCGTGAC GTGCTGCACC CGCTGAATGT GGTGGGCGAC
ACCGAGGGCT GCCGTCTGGA AAATGGCGTT GTCTACACCC CGACCGGTTT CAAGGCCGCG
TTTGAACAAG TCAAAGAAGG CGGCTGGCCC GGTCTCGACA TGCCGGAACA ATACGGCGGC
CAGAACATGC CCTATGTGAT CGGCACCGCC GTGGGCGAGT TTTTCTCTGG CGCGAACCAG
GCGTTTACCA TGTATCAGGG CCTGACCCAT GGCGCGGCTT CGGCCATTCT GGCGCATGGC
ACCGACGCAC AGAAAGATAC CTATCTGCCC AAGATGGTCT CTTGCGAGTG GACCGGCACC
ATGAACCTGA CGGAGCCCCA TTGCGGCACC GATCTGGGCC TCATGCGCAC CAAGGCCGAA
CCGCAAGACG ATGGGTCCTA TCTCGTCACC GGGCAAAAAA TCTTTATCTC TGCTGGCGAT
CACGACATGT CCGAAAACGT GATCCATCTG GTGCTGGCCA AGATCCCCGG CGGCCCCGAT
GGTATCAAGG GCGTGTCGCT CTTTATCGTG CCGAAGTTCA TCGTGAATGA GGACGGCACC
CCCGGCGAGC GCAACGGCGT TTCGGTCGGC AAGATCGAAG AGAAAATGGG CATCCACGGC
AACTCTACCT GCGTGATGAA CTATGATGGC GCCAAAGGTT GGCTCCTCGG GGACATGCAC
AAGGGCATGC GCGCCATGTT CACCATGATG AACGAAGCGC GTCTGGGCGT GGGCATGCAG
GGTCTGGCGC AGGCCGAGGC CGCCTATCAA AACGCGGTGG AATACGCCAA GGACCGCCTT
CAGGGCCGTG ACGTGACCGG CGCGAAGAAC CCCGATGGCC CGGCAGATCC GCTGATCGTC
CACCCGGACA TTCGTCGTAA CCTCATGGAT CAAAAGAGCT TTGCCGAGGG CGCGCGGGCC
TTTATCCTCT GGGGCGCGAC CATGATCGAC AAGGCACATC GTTCTGGGGA CAAGGACGCC
GATGGGCTGA TCTCTCTGCT CACGCCGGTT ATCAAAGGGT TCCTGACCGA CAAGGGCTAT
GACATGACCG TGCAGGCCCA GCAGGTTTAC GGCGGCCATG GCTACATCGA GGAATGGGGC
ATGTCGCAAT ATACCCGCGA CGCCCGTATC GCAATGATCT ACGAGGGCGC AAACGGCGTG
CAGGCGCTGG ATCTGGTGGG GCGCAAGCTG GCGCAGGACG GCGGCAAGCA CGTGATGGCC
TTCTTTGACA TGGTCAAAGG GTTCTGCAAG GAAAACGCCG AGATCTCTGA CGCTTATGCC
AAGGACTTCA TTGAGCCTCT GAAAGCGGCC TCCAAGGATC TGCAGGCGGC CGGGATGTAT
TTCATGCAAA ACGGCATGAA GAACCCCAAC AATGCGCTCG CAGGCTCCAC CGATTTCATG
CACATGTTCG GTCATGTCTG CCTTGGCCTC ATGTGGGCGA TGATGGGCAA AGCCGCGCAA
AAGGCGCTTG ACGAAGGGGC GTCGGACGCG GCGTTCTACG AGACGAAACT CGCCACCGGC
CGCTACTATA TGGCACGTCA GTTGCCCGCG ACAAAACTGC ACCTGGCCCG CATTGAGACC
GGTGCCGACA CGGTGATGGC GCTCGACGCC GCACAGTTCT GA
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| Protein sequence | MPSYTAPTKD TQFVLHDVLN IKDAGIPGYD ELEPDFTGAV LEEAGKIARD VLHPLNVVGD
TEGCRLENGV VYTPTGFKAA FEQVKEGGWP GLDMPEQYGG QNMPYVIGTA VGEFFSGANQ
AFTMYQGLTH GAASAILAHG TDAQKDTYLP KMVSCEWTGT MNLTEPHCGT DLGLMRTKAE
PQDDGSYLVT GQKIFISAGD HDMSENVIHL VLAKIPGGPD GIKGVSLFIV PKFIVNEDGT
PGERNGVSVG KIEEKMGIHG NSTCVMNYDG AKGWLLGDMH KGMRAMFTMM NEARLGVGMQ
GLAQAEAAYQ NAVEYAKDRL QGRDVTGAKN PDGPADPLIV HPDIRRNLMD QKSFAEGARA
FILWGATMID KAHRSGDKDA DGLISLLTPV IKGFLTDKGY DMTVQAQQVY GGHGYIEEWG
MSQYTRDARI AMIYEGANGV QALDLVGRKL AQDGGKHVMA FFDMVKGFCK ENAEISDAYA
KDFIEPLKAA SKDLQAAGMY FMQNGMKNPN NALAGSTDFM HMFGHVCLGL MWAMMGKAAQ
KALDEGASDA AFYETKLATG RYYMARQLPA TKLHLARIET GADTVMALDA AQF
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