| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0810 |
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| Symbol | |
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| ID | 7971862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 893181 |
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| End bp | 894977 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791408 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002942729 |
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| Protein GI | 239813819 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGCT ACAACCCACC CGTACGCGAC ATGCAGTTCG TGCTGCACGA AGTGCTCAAC
GTCGCCGACG AACTCAAGGC GCTTCCGGCC CATGCCGAGA CCGATGCCGA CACCATCAAC
GCGGTGATCG AGGAGGCCGG CAAGTTTGCC GCCGAGGTGA CCTTCCCGCT CAACATCAGC
GGCGACGAAG AGGGCTGCAC GCTCGACAAG GCCACGCATG AAGTCAAGAC GCCCAAGGGC
TTCAAGGACG CCTACGCCAA GTACGTCGAA GGCGGCTGGC CCGCGCTGTC GTGCGACCCG
GCCTTCGGCG GCCAGGGCCT GCCCTTCGTG GTGAACCAGT GCCTGTTCGA GATGCTCAAC
AGCGCCAACC AGGCCTGGAC CATGTACCCG GGCCTCTCGC ACGGCGCCTA CGAAGCGCTG
GTGGCCCACG GCACCGAAGA GCAGAAGAAG ACCTACCTGC CCAAGCTCAC GAGCGGCGAA
TGGACCGGCA CCATGTGCCT GACCGAGCCG CACTGCGGCA CCGACCTGGG CCTCTTGCGC
ACCAAGGCCG AGCCGCAGGC CGACGGCAGC TACCGCATCA CCGGCAACAA GATCTTCATC
TCGGCCGGCG AGCACGACAT GGCCGACAAC ATCATCCACC TGGTGCTGGC CCGCCTGCCC
GATGCGCCCA AGGGCAGCAA GGGCATCAGC CTGTTCGTGG TGCCCAAGTA CAAGGTCAAG
GCCGACGGCT CGCTCGGCGA GCGCAACCCG ATCTTCTGCG CCGGCCTCGA GCACAAGATG
GGCATCCACG GCAACGCCAC CGCGCAGATC GTCATCGAAG GCGCCACCGG CTCGCTGGTG
GGCGAGCCCA ACAAGGGCCT GCAGGCCATG TTCGTGATGA TGAACGCCGC GCGCCTGGGC
GTGGGCAACC AGTCGCTCGG CCTGACCGAG GTGGCCTACC AGAATGCGCT GGCCTACGCC
AAGGACCGCA TCCAGATGCG CTCGCTCTCG GGCGTGAAGG CCAAGGACAA GGAAGCCGAC
CCCATCATCG TGCACCCCGA CGTGCGCAAG ATGCTGCTCA CCGCCAAGGC CTACGCCGAA
GGCGGCCGCG CGCTGCAGAT CTTCTGCACG ATGCTGCTCG ACAAGGAGCA CCACCACCCG
GACGAGAAGG TGCGCAAGGA CTCGGGCGAA CTGGTGGCGC TGCTCACGCC CATCGTCAAG
GCCTTCATCA CCGACAACGG CCACATCGCG ACCAACGCCT GCATGCAGGT GTTCGGCGGC
CACGGCTTCA TCAAGGAATG GGGCATGGAG CAGTTCGTGC GGGACAACCG CATCAACATG
ATCTACGAGG GCACCAACAC CATCCAGTCG CTGGACCTCT TGGGCCGCAA GGTGCTGGGC
AACAACGGCG CGTCGCTCAA GAAGTTCGGC AAGCTGGTTG CGAAGCTGGT GGAGGAAGAG
GGCGTGAACG AGAAGATGGC CGAGTTCATC AACCCGATCG CGGGCCTGGG CGACCAGCTC
ACCAAGTTCA CCACCGAGAT CGGCTTCAAG GGTTTCCAGA ACCCCGACGA AGTGGGCGCC
GCCGCGGTCG ACTACCTGCG CGTGGCCGGC CACTTCGTGT TCGGCTACCT GTTCGCGCGC
ATGGCGCAGG TCGCGCTGCG CCAGATCGCC GCAGGCAACA CCGATCCGTT CTACGTTGCC
AAGCTGCAGA CCGCGCGCTT CTACTTCGCC AAGCTGTTCC CCGAAACCGC GACGCTGATG
CGCACTGCAC GCGCCGGCAG CAAGGTGCTG ATGGACACCG ACGCGGCGCT GGCCTGA
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| Protein sequence | MPSYNPPVRD MQFVLHEVLN VADELKALPA HAETDADTIN AVIEEAGKFA AEVTFPLNIS
GDEEGCTLDK ATHEVKTPKG FKDAYAKYVE GGWPALSCDP AFGGQGLPFV VNQCLFEMLN
SANQAWTMYP GLSHGAYEAL VAHGTEEQKK TYLPKLTSGE WTGTMCLTEP HCGTDLGLLR
TKAEPQADGS YRITGNKIFI SAGEHDMADN IIHLVLARLP DAPKGSKGIS LFVVPKYKVK
ADGSLGERNP IFCAGLEHKM GIHGNATAQI VIEGATGSLV GEPNKGLQAM FVMMNAARLG
VGNQSLGLTE VAYQNALAYA KDRIQMRSLS GVKAKDKEAD PIIVHPDVRK MLLTAKAYAE
GGRALQIFCT MLLDKEHHHP DEKVRKDSGE LVALLTPIVK AFITDNGHIA TNACMQVFGG
HGFIKEWGME QFVRDNRINM IYEGTNTIQS LDLLGRKVLG NNGASLKKFG KLVAKLVEEE
GVNEKMAEFI NPIAGLGDQL TKFTTEIGFK GFQNPDEVGA AAVDYLRVAG HFVFGYLFAR
MAQVALRQIA AGNTDPFYVA KLQTARFYFA KLFPETATLM RTARAGSKVL MDTDAALA
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